| |
Genus: Tottorivirus
Species: Tottorivirus A
| Type: porcine
picornavirus Japan (PPVJ) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
|
Virus |
Strain |
Region |
Length |
Accession No. |
Host |
Reference |
Comments |
porcine picornavirus Japan (PPVJ)
|
|
PPVJ |
pig/Tottori-WOL/Japan/2015 |
CG(p) |
7062 |
LC113907 |
pig |
Naoi et al., 2016 |
|
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|
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|
unclassified porcine tottori-like viruses
|
|
|
15213_PICO_len_7045_cov_367.153791/USA/2018 |
ppCR |
6282 |
MW504591 |
pig |
Ramesh et al., 2021 |
|
|
|
15214_PICO_len_6519_cov_14.441368/USA/2018 |
ppCR |
6282 |
MW504592 |
pig |
Ramesh et al., 2021 |
|
|
|
15214_PICO_len_6560_cov_22.416603/USA/2018 |
ppCR |
6279 |
MW504593 |
pig |
Ramesh et al., 2021 |
|
|
|
15217_PICO_len_6772_cov_662.502903/USA/2018 |
ppCR |
6285 |
MW504594 |
pig |
Ramesh et al., 2021 |
|
|
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|
CG = complete genome
(p) = partial gene sequence
ppCR = polyprotein-coding region |
Naoi, Y., Kishimoto, M., Masuda, T., Ito, M.,
Tsuchiaka, S., Sano, K., Yamasato, H., Omatsu, T., Aoki, H., Furuya, T.,
Katayama, Y., Oba, M., Okada, T., Shirai, J., Mizutani, T. and Nagai, M.
(2016). Characterization and phylogenetic analysis of a novel
picornavirus from swine feces in Japan. Arch. Virol. 2016 Mar 26 [Epub
ahead of print].
Ramesh A, Bailey ES, Ahyong V, Langelier C, Phelps M,
Neff N, Sit R, Tato C, DeRisi JL, Greer AG, Gray GC. Metagenomic
characterization of swine slurry in a North American swine farm
operation. Sci Rep. 2021 Aug 20;11(1):16994. doi:
10.1038/s41598-021-95804-y. PMID: 34417469; PMCID: PMC8379149.
|
