Tottorivirus A seqs

Child level

Same level

  Genus: Tottorivirus

Species: Tottorivirus A

Type: porcine picornavirus Japan (PPVJ)
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus Strain Region Length Accession No. Host Reference Comments

porcine picornavirus Japan (PPVJ)

PPVJ pig/Tottori-WOL/Japan/2015 CG(p) 7062 LC113907 pig Naoi et al., 2016  

unclassified porcine tottori-like viruses

  15213_PICO_len_7045_cov_367.153791/USA/2018 ppCR 6282 MW504591 pig Ramesh et al., 2021  
  15214_PICO_len_6519_cov_14.441368/USA/2018 ppCR 6282 MW504592 pig Ramesh et al., 2021  
  15214_PICO_len_6560_cov_22.416603/USA/2018 ppCR 6279 MW504593 pig Ramesh et al., 2021  
  15217_PICO_len_6772_cov_662.502903/USA/2018 ppCR 6285 MW504594 pig Ramesh et al., 2021  
CG = complete genome
(p) = partial gene sequence
ppCR = polyprotein-coding region


Naoi, Y., Kishimoto, M., Masuda, T., Ito, M., Tsuchiaka, S., Sano, K., Yamasato, H., Omatsu, T., Aoki, H., Furuya, T., Katayama, Y., Oba, M., Okada, T., Shirai, J., Mizutani, T. and Nagai, M. (2016). Characterization and phylogenetic analysis of a novel picornavirus from swine feces in Japan. Arch. Virol. 2016 Mar 26 [Epub ahead of print].

Ramesh A, Bailey ES, Ahyong V, Langelier C, Phelps M, Neff N, Sit R, Tato C, DeRisi JL, Greer AG, Gray GC. Metagenomic characterization of swine slurry in a North American swine farm operation. Sci Rep. 2021 Aug 20;11(1):16994. doi: 10.1038/s41598-021-95804-y. PMID: 34417469; PMCID: PMC8379149.




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