Avocet & plover megrivirus seqs

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Genus: Megrivirus

Species: unassigned

Avocet megrivirus (AvMeV)

5' UTR L VP0 VP3 VP1 2A1 2A2 2A3 2B 2C 3A 3B 3C 3D 3' UTR

Red-capped plover megrivirus (RPMeV)

5' UTR L VP0 VP3 VP1 2A1 2A2 2A3 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

CG = complete genome (p) = partial gene sequence
Virus	Strain	Region	Length	Accession No.	Host	Reference	Comments
Avocet megrivirus (AvMeV)
AvMeV	MW11/Australia/2013	VP3(p)-3'UTR	6875	MH453805	Recurvirostra novaehollandiae	Wille et al., 2018
AvMeV	MW12/Australia/2013	P2(p)-3'UTR	5283	MH453806	Recurvirostra novaehollandiae	Wille et al., 2018

Red-capped plover megrivirus (RPMeV)
RPMeV	MW07/Australia/2012	CG(p)	9002	MK204390	Charadrius ruficapillus	Wille et al., 2019

References

Wille M, Eden JS, Shi M, Klaassen M, Hurt AC, Holmes EC. Virus-virus interactions and host ecology are associated with RNA virome structure in wild birds. Mol Ecol. 2018 Oct 29. doi: 10.1111/mec.14918. [Epub ahead of print] PubMed PMID: 30375075.

Wille M, Shi M, Klaassen M, Hurt AC, Holmes EC. Virome heterogeneity and connectivity in waterfowl and shorebird communities. ISME J. 2019 Jun 25. doi: 10.1038/s41396-019-0458-0. [Epub ahead of print] PubMed PMID: 31239538.