Rafivirus A seqs

The
Picornavirus
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Child level

Same level

Genus: Rafivirus

Species: Rafivirus A

Type: Tortoise rafivirus A1
(TRaV-1)

5' UTR L VP0 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

CG = complete genome (p) = partial gene sequence
Virus	Strain	Region	Length	Accession No.	Reference	Host	Comments
Tortoise rafivirus A1 (TRaV-A1)
TRaV-A1	tortoise/UF4/USA/2009	CG(p)	7204	KJ415177	Ng et al., 2015	Indotestudo forsteni
TRaV-A1	tortoise/WHWGGF74766/China	CG(p)	7315	MG600109	Shi et al., 2018	Mauremys sinensis

References

Ng, T.F., Wellehan, J.F., Coleman, J.K., Kondov, N.O., Deng, X., Waltzek, T.B., Reuter, G., Knowles, N.J. and Delwart, E. (2015). A tortoise-infecting picornavirus expands the host range of the family Picornaviridae. Arch. Virol. 160(5): 1319-1323.

Shi M, Lin XD, Chen X, Tian JH, Chen LJ, Li K, Wang W, Eden JS, Shen JJ, Liu L, Holmes EC, Zhang YZ. The evolutionary history of vertebrate RNA viruses. Nature. 2018 Apr 4. doi: 10.1038/s41586-018-0012-7. [Epub ahead of print] PubMed PMID: 29618816.

Species: Rafivirus A

Tortoise rafivirus A1 (TRaV-A1)

References