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  Genus: Rabovirus

Species: Rabovirus A

Type: rabovirus A1 (RaBoV-A1)  
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Type: rabovirus A2 (RaBoV-A2)  
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus Strain Region Length Accession No. Reference Host Comments

Rabovirus A1 (RaBoV-A1)

RaBoV-A1 rat/NYC-B10/USA/2013 CG(p) 7433 KJ950883 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-A11/USA/2013 2B(p) 350 KJ950884 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-A15/USA/2013 2B(p) 350 KJ950885 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-A17/USA/2013 2B(p) 350 KJ950886 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-A19/USA/2013 2B(p) 350 KJ950887 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-A5/USA/2013 2B(p) 350 KJ950888 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-B10/USA/2013 2B(p) 350 KJ950889 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-B12/USA/2013 2B(p) 350 KJ950890 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-B5/USA/2013 2B(p) 350 KJ950891 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-B8/USA/2013 2B(p) 350 KJ950892 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-B9/USA/2013 2B(p) 350 KJ950893 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-C1/USA/2013 2B(p) 350 KJ950894 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-C17/USA/2013 2B(p) 350 KJ950895 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-C18/USA/2013 2B(p) 350 KJ950896 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-C5/USA/2013 2B(p) 350 KJ950897 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-C9/USA/2013 2B(p) 350 KJ950898 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D14/USA/2013 2B(p) 350 KJ950899 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D19/USA/2013 2B(p) 350 KJ950900 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D25/USA/2013 2B(p) 350 KJ950901 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D5/USA/2013 2B(p) 350 KJ950902 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D6/USA/2013 2B(p) 350 KJ950903 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-D7/USA/2013 2B(p) 350 KJ950904 Firth et al., 2014 Rattus norvegicus  
RaBoV-A1 rat/NYC-E18/USA/2012 2B(p) 350 KJ950905 Firth et al., 2014 Rattus norvegicus  

Rabovirus A2 (RaBoV-A2)

RaBoV-A2 rat/Berlin/Jan2011/0572 CG 7853 KP233897 Ng et al., 2015 Rattus norvegicus  
RaBoV-A2 KS/11/0572-1/GER/2011 VP2/VP3 746 KM030274 Sachsenröder et al., 2014 Rattus norvegicus  
RaBoV-A2 KS/11/0576-2/GER/2011 3BC 412 KM030275 Sachsenröder et al., 2014 Rattus norvegicus  
               

unassigned raboviruses

RaBoV-A rat/Wencheng-Rn449/China/2012 CG(p) 7656 MF352425 Guo & Zhang, unpub. Rattus norvegicus  
RaBoV-A rat/Wencheng-Rt38-1/China/2012 CG(p) 7841 MF352417 Guo & Zhang, unpub. Rattus tanezumi  
RaBoV-A rat/Ruian-Rn93-2/China/2012 CG(p) 7278 MF352408 Guo & Zhang, unpub. Rattus norvegicus  
               
CG = complete genome
(p) = partial gene sequence

References

Firth, C., Bhat, M., Firth, M.A., Williams, S.H., Frye, M.J., Simmonds, P., Conte, J.M., Ng, J., Garcia, J., Bhuva, N.P., Lee, B., Che, X., Quan, P.L. and Lipkin, W.I. (2014). Detection of zoonotic pathogens and characterization of novel viruses carried by commensal Rattus norvegicus in New York City. mBio 5(5). pii: e01933-14.

Ng, T.F., Sachsenröder, J., Reuter, G., Knowles, N.J., Delwart, E. and Johne, R. (2015). Rabovirus: a proposed new picornavirus genus that is phylogenetically basal to enteroviruses and sapeloviruses. Arch. Virol. 160: 2569-2575.

Sachsenröder, J., Braun, A., Machnowska, P., Ng, T.F., Deng, X., Guenther, S., Bernstein, S., Ulrich, R.G., Delwart, E. and Johne, R. (2014). Metagenomic identification of novel enteric viruses in urban wild rats and genome characterization of a group A rotavirus. J. Gen. Virol. 95: 2734-2747.

 

 
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