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 Sapelovirus B seqs

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  Genus: Sapelovirus

Species: Simian sapelovirus (proposed new species name "Sapelovirus B")

Serotype: simian sapelovirus 1 (SSV-1)  
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: simian sapelovirus 2 (SSV-2)  
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: simian sapelovirus 3 (SSV-3)  
5' UTR L VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
     

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus Strain

Region

Length

Accession No.

Reference Comments

Simian sapelovirus 1 (SSV-1)

SSV-1 SV2-2383 VP1 852 AF326755 Oberste et al., 2002  
CG(p) 8126 AY064708 Oberste et al., 2003 5' end of genome missing
             

Simian sapelovirus 2 (SSV-2)

SSV-2 SV49-2600 CG(p) 8108

awaited

Knowles et al., unpub. 5' end of genome missing
5'UTR(p)+L+VP4(p) 884 AY064720 Oberste et al., 2003  
VP1 876 AF326765 Oberste et al., 2002  
3D(p) 599

AY064714

Oberste et al., 2003  
SSV-2 VRDL1 CG(p) 7971 EU789367 Victoria et al., 2008 5' end of genome missing
             

Simian sapelovirus 3 (SSV-3)

SSV-3 SV16-2450-SD 5'UTR(p)+L+VP4(p) 1059 AY064715 Oberste et al., 2003  
VP1 879 AF326752 Oberste et al., 2002  
3D(p) 599 AY064709 Oberste et al., 2003  
SSV-3 SV18-2481-B2 5'UTR(p)+L+VP4(p) 1060 AY064716 Oberste et al., 2003  
VP1  873 AF326753 Oberste et al, 2002  
3D(p) 599 AY064710 Oberste et al., 2003  
3D(p) 492 n/a Pöyry et al., 1999 sequence is identical to AY064710
SSV-3 SV42-M9 5'UTR(p)+L+VP4(p) 1059 AY064717 Oberste et al., 2003  
VP1 888 AF326760 Oberste et al, 2002  
3D(p) 599 AY064711 Oberste et al., 2003  
SSV-3 SV44-OM114s 5'UTR(p)+L+VP4(p) 1026 AY064718 Oberste et al., 2003  
VP1 885 AF326762 Oberste et al, 2002  
3D(p) 599 AY064712 Oberste et al., 2003  
SSV-3 SV45-M19h 5'UTR(p)+L+VP4(p) 1053 AY064719 Oberste et al., 2003  
VP1 879 AF326763 Oberste et al, 2002  
3D(p) 599 AY064713 Oberste et al., 2003  
SSV-3 RhMk/WUHARV-1 CG(p) 8059 JX627573 Handley et al., ,2012 USA: 10-Jan-2010
SSV-3 RhMk/WUHARV-2 CG(p) 8025 JX627574 Handley et al., ,2012 USA: 10-Jan-2010
SSV-3 Cam13/Cambodia/2015 CG(p) 8195 LC503602 Zhang et al., 2019 Macaca fascicularis
             

Simian sapelovirus untyped

SSV-? Rh/Cg10192/USA/2014 VP4+VP2 1537 KT984501 Kapusinszky et al., unpub. Macaca mulatta
SSV-? Rh/Cg1921/USA/2014 ? 1025 KT984502 Kapusinszky et al., unpub. Macaca mulatta
SSV-? Rh/Cg7136/USA/2014 ? 1644 KT984503 Kapusinszky et al., unpub. Macaca mulatta
SSV-? md/NGR_2017_NHP_SV CG(p) 8207 MN784122 George et al., unpub. Mandrillus leucophaeus
             
CG, complete genome
(p), partial gene sequence
*, prototype strain

References

Handley, S.A., Thackray, L.B., Zhao, G., Presti, R., Miller, A.D., Droit, L., Abbink, P., Maxfield, L.F., Kambal, A., Duan, E., Stanley, K., Kramer, J., Macri, S.C., Permar, S.R., Schmitz, J.E., Mansfield, K., Brenchley, J.M., Veazey, R.S., Stappenbeck, T.S., Wang, D., Barouch, D.H. and Virgin, H.W. (2012). Pathogenic simian immunodeficiency virus infection is associated with expansion of the enteric virome. Cell 151: 253-266.

Oberste, M.S., Maher, K. and Pallansch, M.A. (2002). Molecular phylogeny and proposed classification of the simian picornaviruses. J. Virol. 76: 1244-1251.

Oberste, M.S., Maher, K. and Pallansch, M.A. (2003). Genomic evidence that simian virus 2 and six other simian picornaviruses represent a new genus in Picornaviridae. Virology 314: 283-293.

Pöyry, T., Kinnunen, L., Hovi, T. and Hyypiä, T. (1999). Relationships between simian and human enteroviruses. Journal of General Virology 80: 635-638.

Victoria, J.G., Kapoor, A., Dupuis, K., Schnurr, D.P. and Delwart, E.L. (2008). Rapid Identification of Known and New RNA Viruses from Animal Tissues. PLoS Pathog 4(9): e1000163. doi:10.1371/journal.ppat.1000163.

Zhang W, Kataoka M, Doan HY, Ami Y, Suzaki Y, Takeda N, Muramatsu M, Li TC. Characterization of a Novel Simian Sapelovirus Isolated from a Cynomolgus Monkey using PLC/PRF/5 Cells. Sci Rep. 2019 Dec 27;9(1):20221. doi: 10.1038/s41598-019-56725-z. PubMed PMID: 31882888; PubMed Central PMCID: PMC6934677.

 
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