| |
Genus:
Aquamavirus
Species: Aquamavirus A
| Serotype: Seal aquamavirus A1 (formerly seal picornavirus
1) |
|
| 5' UTR |
VP0 |
VP3 |
VP1 |
2A1 |
2A2 |
2B |
2C |
3A |
3B1 |
3B2 |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
Seal aquamavirus A1 (SeAV-A1)
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.02.21/2002 |
CG |
6693 |
EU142040 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/PHH.00.26/2000 |
VP3(p)-2C(p) |
1428 |
EU152974 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.01.00/2001 |
VP3(p)-2C(p) |
1428 |
EU152975 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.01.15/2001 |
VP3(p)-2C(p) |
1428 |
EU152976 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.00.19/2000 |
VP3(p)-2C(p) |
1428 |
EU152977 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.00.04/2000 |
VP3(p)-2C(p) |
1428 |
EU152978 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.00.26/2000 |
VP3(p)-2C(p) |
1428 |
EU152979 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Pusa
hispida/Canada/HO.00.30/2000 |
VP3(p)-2C(p) |
1428 |
EU152980 |
Kapoor et al., 2008 |
|
| SeAV-A1 |
Phoca vitulina/Holland/1988 |
CG |
6697 |
n/a |
Knowles & Wadsworth, 2010 |
|
| |
|
|
|
|
|
|
Ribbon seal picornavirus
|
| RsPV |
Histriophoca fasciata/WVL17251-06/USA/2005 |
CG(p) |
6683 |
MT235243 |
Rodrigues et al., 2020 |
|
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence |
Kapoor, A., Victoria, J., Simmonds, P., Wang, C., Shafer, R.W., Nims,
R., Nielsen, O. and Delwart, E. (2008). A highly divergent picornavirus
in a marine mammal. J. Virol. 82: 311-320.
Knowles, N.J. and Wadsworth, J. (2010). The complete genome sequence
of a picornavirus isolated from a harbour (common) seal (Phoca
vitulina). EUROPIC 2010, St. Andrews, Scotland, 11-16 September
2010.
Rodrigues TCS, Nielsen O, Burek-Huntington KA, Popov VL, Raverty S,
Lambourn DM, Subramaniam K, Waltzek TB. Genomic Characterization of
Picornaviruses Isolated From Ribbon (Histriophoca fasciata)
and Harbor (Phoca vitulina) Seals. Front Vet Sci. 2020 Oct
30;7:554716. doi: 10.3389/fvets.2020.554716. PMID: 33195526; PMCID:
PMC7661754. |
