|
Genus: Rabovirus
Species: Rabovirus A
Type: rabovirus A1 (RaBoV-A1) |
|
5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
Type: rabovirus A2 (RaBoV-A2) |
|
5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
Type: rabovirus A3 (RaBoV-A3) |
|
5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
Type: rabovirus A4 (RaBoV-A4) |
|
5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
Type: rabovirus A5 (RaBoV-A5) |
|
5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Host |
Comments |
Rabovirus A1 (RaBoV-A1)
|
RaBoV-A1 |
rat/Berlin/Jan2011/0572 |
CG |
7853 |
KP233897 |
Ng et al., 2015 |
Rattus norvegicus |
|
RaBoV-A1 |
KS/11/0572-1/GER/2011 |
VP2/VP3 |
746 |
KM030274 |
Sachsenröder et al., 2014 |
Rattus norvegicus |
|
RaBoV-A1 |
KS/11/0576-2/GER/2011 |
3BC |
412 |
KM030275 |
Sachsenröder et al., 2014 |
Rattus norvegicus |
|
|
|
|
|
|
|
|
|
Rabovirus A2 (RaBoV-A2)
|
RaBoV-A2 |
rat/Wencheng-Rn449/China/2012 |
CG(p) |
7656 |
MF352425 |
Guo & Zhang, unpub. |
Rattus norvegicus |
|
|
|
|
|
|
|
|
|
Rabovirus A3 (RaBoV-A3)
|
RaBoV-A3 |
rat/NYC-B10/USA/2013 |
CG(p) |
7433 |
KJ950883 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-A11/USA/2013 |
2B(p) |
350 |
KJ950884 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-A15/USA/2013 |
2B(p) |
350 |
KJ950885 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-A17/USA/2013 |
2B(p) |
350 |
KJ950886 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-A19/USA/2013 |
2B(p) |
350 |
KJ950887 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-A5/USA/2013 |
2B(p) |
350 |
KJ950888 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-B10/USA/2013 |
2B(p) |
350 |
KJ950889 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-B12/USA/2013 |
2B(p) |
350 |
KJ950890 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-B5/USA/2013 |
2B(p) |
350 |
KJ950891 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-B8/USA/2013 |
2B(p) |
350 |
KJ950892 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-B9/USA/2013 |
2B(p) |
350 |
KJ950893 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-C1/USA/2013 |
2B(p) |
350 |
KJ950894 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-C17/USA/2013 |
2B(p) |
350 |
KJ950895 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-C18/USA/2013 |
2B(p) |
350 |
KJ950896 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-C5/USA/2013 |
2B(p) |
350 |
KJ950897 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-C9/USA/2013 |
2B(p) |
350 |
KJ950898 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D14/USA/2013 |
2B(p) |
350 |
KJ950899 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D19/USA/2013 |
2B(p) |
350 |
KJ950900 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D25/USA/2013 |
2B(p) |
350 |
KJ950901 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D5/USA/2013 |
2B(p) |
350 |
KJ950902 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D6/USA/2013 |
2B(p) |
350 |
KJ950903 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-D7/USA/2013 |
2B(p) |
350 |
KJ950904 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
rat/NYC-E18/USA/2012 |
2B(p) |
350 |
KJ950905 |
Firth et al., 2014 |
Rattus norvegicus |
|
RaBoV-A3 |
RtRn-PicoV/GD2015 |
CG |
7850 |
KY432936 |
Wu et al.,
2018 |
Rattus norvegicus |
|
|
|
|
|
|
|
|
|
Rabovirus A4 (RaBoV-A4)
|
RaBoV-A4 |
rat/Wencheng-Rt38-1/China/2012 |
CG(p) |
7841 |
MF352417 |
Guo & Zhang, unpub. |
Rattus tanezumi |
|
|
|
|
|
|
|
|
|
Rabovirus A5 (RaBoV-A5)
|
RaBoV-A5 |
rat/Ruian-Rn93-2/China/2012 |
CG(p) |
7278 |
MF352408 |
Guo & Zhang, unpub. |
Rattus norvegicus |
|
|
|
|
|
|
|
|
|
Rabovirus A (unassigned)
|
RaBoV-A |
RtNn-PicoV/SAX2016 |
3A(p)-3'UTR |
2198 |
KY432937 |
Wu et al.,
2018 |
Rattus norvegicus |
|
|
|
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence |
Firth, C., Bhat, M., Firth, M.A.,
Williams, S.H., Frye, M.J., Simmonds, P., Conte, J.M., Ng, J.,
Garcia, J., Bhuva, N.P., Lee, B., Che, X., Quan, P.L. and Lipkin,
W.I. (2014). Detection of zoonotic pathogens and characterization of
novel viruses carried by commensal Rattus norvegicus in New
York City. mBio 5(5). pii: e01933-14.
Ng, T.F., Sachsenröder, J., Reuter,
G., Knowles, N.J., Delwart, E. and Johne, R. (2015). Rabovirus: a
proposed new picornavirus genus that is phylogenetically basal to
enteroviruses and sapeloviruses. Arch. Virol. 160: 2569-2575.
Sachsenröder, J., Braun, A., Machnowska, P., Ng, T.F., Deng, X.,
Guenther, S., Bernstein, S., Ulrich, R.G., Delwart, E. and Johne, R.
(2014). Metagenomic identification of novel enteric viruses in urban
wild rats and genome characterization of a group A rotavirus. J. Gen. Virol.
95: 2734-2747.
Wu Z, Lu L, Du J, Yang L, Ren X, Liu B, Jiang J,
Yang J, Dong J, Sun L, Zhu Y, Li Y, Zheng D, Zhang
C, Su H, Zheng Y, Zhou H, Zhu G, Li H, Chmura A,
Yang F, Daszak P, Wang J, Liu Q, Jin Q. Comparative
analysis of rodent and small mammal viromes to
better understand the wildlife origin of emerging
infectious diseases. Microbiome. 2018 Oct
3;6(1):178. doi: 10.1186/s40168-018-0554-9. PubMed
PMID: 30285857; PubMed Central PMCID: PMC6171170.
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