|
Child level |
|
|
|
Same level |
 |
|
| |
Genus: Dicipivirus
Species: Dicipivirus acadici
|
Type:
cadicivirus
A1
(CdV-A1)
or canine picodicistrovirus
1 (CaPdV-1) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
IGR |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
|
|
|
(White areas indicate genes which
haven't yet been sequenced
completely; grey areas are where
only partial sequences exist)
|
|
| |
| Virus |
Strain |
Region |
Length |
Accession
no. |
Reference |
Comments |
Cadicivirus A1 (CdV-A1) aka Canine picodicistrovirus 1 (CaPdV-1)
|
| CaPdV-1 |
dog/209/Hong Kong/2008 |
CG |
8785 |
JN819202 |
Woo et al.,
2012 |
Canis lupus
familiaris |
| CaPdV-1 |
dog/236/Hong Kong/2008 |
CG |
8784 |
JN819203 |
Woo et al.,
2012 |
Canis lupus
familiaris |
| CaPdV-1 |
dog/244U/Hong Kong/2008 |
CG |
8784 |
JN819204 |
Woo et al.,
2012 |
Canis lupus
familiaris |
| CaPdV-1 |
fox/Tod virus-1/AUS/2019 |
2C-3C |
2058 |
MT833880 |
Campbell et
al., 2020 |
Vulpes vulpes |
| CaPdV-1 |
fox/Tod virus-2/AUS/2019 |
2A-3D |
4263 |
MT833876 |
Campbell et
al., 2020 |
Vulpes vulpes |
| CaPdV-1 |
raccoon dog/RDX/CHA/2015 |
CG(p) |
8715 |
MT498598 |
Yang et al.,
2021 |
Nyctereutes
procyonoides |
| CaPdV-1 |
Dogfe449C1/CHN/2020/2021 |
CG(p) |
8700 |
OQ198164 |
Jiang & Zhang,
unpub. |
Canis lupus
familiaris |
| CaPdV-1 |
Dogfe343C1/CHN/2020/2021 |
CG(p) |
8749 |
OQ198171 |
Jiang & Zhang,
unpub. |
Canis lupus
familiaris |
| CaPdV-1 |
Dogfe365C1/CHN/2020/2021 |
CG(p) |
8721 |
OQ198169 |
Jiang & Zhang,
unpub. |
Canis lupus
familiaris |
| CaPdV-1 |
Dogfe341C2/CHN/2020/2021 |
CG(p) |
8225 |
OQ198172 |
Jiang & Zhang,
unpub. |
Canis lupus
familiaris |
| CaPdV-1 |
fox113/HUN/2022 |
CG(p) |
8792 |
PQ177898 |
Feher et al.,
unpub. |
Vulpes vulpes |
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence |
|
|
| |
References
Campbell SJ, Ashley W, Gil-Fernandez M, Newsome TM, Di
Giallonardo F, Ortiz-Baez AS, Mahar JE, Towerton AL, Gillings M,
Holmes EC, Carthey AJR, Geoghegan JL. Red fox viromes in urban and
rural landscapes. Virus Evol. 2020 Aug 25;6(2):veaa065. doi:
10.1093/ve/veaa065. PMID: 33365150; PMCID: PMC7744383.
Woo, P.C., Lau, S.K., Choi, G.K., Huang, Y., Teng,
J.L., Tsoi, H.W., Tse, H., Yeung, M.L., Chan, K.H., Jin, D.Y. and
Yuen, K.Y. (2012). Natural occurrence and characterization of two
internal ribosome entry site elements in a novel virus, canine
picodicistrovirus, in the picornavirus-like superfamily. J. Virol.
86: 2797-2808. Epub 2011 Dec 28.
Yang S, He Y, Chen X, Kalim U, Wang Y, Yang S, Qi H, Cheng H, Lu X,
Wang X, Shen Q, Zhang W. Viral Metagenomics Reveals Diverse Viruses
in the Feces Samples of Raccoon Dogs. Front Vet Sci. 2021 Jul
12;8:693564. doi: 10.3389/fvets.2021.693564. PMID: 34322538; PMCID:
PMC8311183.
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