| |
Genus: Cosavirus
Species: Cosavirus E
| |
Type: cosavirus E1 |
|
5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A1 |
2A2 |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
Type: cosavirus E2 |
|
5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A1 |
2A2 |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
Cosavirus E (CoSV-E)
|
| CoSV-E1 |
Australia/81 |
CG(p) |
6562 |
FJ555055 |
Holtz et al., 2008 |
5' end missing |
| CoSV-E2 |
NG385 |
CG(p) |
6752 |
JN867757 |
Kapusinszky et al., 2012 |
5' end missing |
| CoSV-E2 |
NG22 |
VP1(p) |
911 |
JN867779 |
Kapusinszky et al., 2012 |
|
| CoSV-E? |
BOL/03-11689 |
VP3(p)+VP1(p) |
486 |
JX219512 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-11675 |
VP3(p)+VP1(p) |
486 |
JX219513 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-11678B |
VP3(p)+VP1(p) |
240 |
JX219514 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/03-10653D |
VP3(p)+VP1(p) |
480 |
JX219515 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-10811B |
VP3(p)+VP1(p) |
486 |
JX219516 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-10674 |
VP3(p)+VP1(p) |
483 |
JX219517 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-10823B |
VP3(p)+VP1(p) |
483 |
JX219518 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-11684 |
VP3(p)+VP1(p) |
483 |
JX219519 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-11680 |
VP3(p)+VP1(p) |
438 |
JX219520 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/02-11679B |
VP3(p)+VP1(p) |
486 |
JX219521 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/03-11691 |
VP3(p)+VP1(p) |
441 |
JX219522 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/03-11687 |
VP3(p)+VP1(p) |
477 |
JX219523 |
Nix et al., 2013 |
|
| CoSV-E? |
BOL/03-11692 |
VP3(p)+VP1(p) |
477 |
JX219524 |
Nix et al., 2013 |
|
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence
*, type not known |
Holtz, L.R., Finkbeiner, S.R., Kirkwood, C.D. and Wang, D. (2008).
Identification of a novel picornavirus related to cosaviruses in a
child with acute diarrhea. Virology Journal 5: 159;
doi:10.1186/1743-422X-5-159.
Kapusinszky, B., Phan, T.G., Kapoor, A. and Delwart, E. (2012).
Genetic diversity of the genus Cosavirus in the family
Picornaviridae: a new species, recombination, and 26 new genotypes.
PLoS One. 7(5):e36685. Epub 2012 May 16.
Nix, W.A., Khetsuriani, N., Peñaranda, S., Maher, K., Venczel, L.,
Cselkó, Z., Freire, M.C., Cisterna, D., Lema, C.L., Rosales, P.,
Rodriguez, J.R., Rodriguez, W., Halkyer, P., Ronveaux, O., Pallansch,
M.A. and Oberste, M.S. (2013). Diversity of picornaviruses in rural
Bolivia. J. Gen. Virol. 94: 2017-2028. |
