|
|
Genus: Enterovirus
Species: Enterovirus B
Serotype: Coxsackievirus B5 (CVB5)
Variant: Swine vesicular disease virus 1 (SVDV-1)
|
|
Virus |
Strain |
Region
|
Length |
Accession No. |
Reference |
Comments |
Swine vesicular disease virus 1 (SVDV-1)
|
Austria |
SVDV-1 |
AUR/1/73 (1972) |
CG(p) |
6938 |
KT284994 |
Bruhn et al., 2015 |
|
5'UTR(p) |
681 |
AY875984 |
Shaw
et al., 2005 |
|
VP1(p) |
802 |
AJ004611 |
Zhang et al., 1999 |
|
3BC(p) |
643 |
AJ004564 |
Zhang et al., 1999 |
|
|
|
|
|
|
|
|
Belgium |
SVDV-1 |
BEL/2/79 |
VP1(p) |
660 |
AJ004612 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004565 |
Zhang et al., 1999 |
|
|
|
|
|
|
|
|
Bulgaria |
SVDV-1 |
BUL/2/71 |
CG(p) |
6938 |
KT284979 |
Bruhn et al., 2015 |
|
5'UTR(p) |
614 |
AY876011 |
Shaw
et al., 2005 |
|
|
|
|
|
|
|
|
France |
SVDV-1 |
FRA/1/73 |
CG(p) |
6938 |
KT284999 |
Bruhn et al., 2015 |
|
5'UTR(p) |
681 |
AY875986 |
Shaw
et al., 2005 |
|
VP1(p) |
762 |
AJ004613 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004566 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250556 |
Hakhverdyan
et al.,
2006 |
|
Germany |
SVDV-1 |
D6494/73 |
VP1(p) |
573 |
Y14517 |
Brocchi et al., 1997 |
|
SVDV-1 |
D6533/75 |
VP1(p) |
251 |
Y14518 |
Brocchi et al., 1997 |
|
SVDV-1 |
D6629/81 |
VP1(p) |
284 |
Y14519 |
Brocchi et al., 1997 |
|
SVDV-1 |
D6629/81 (variant sequence) |
VP1(p) |
284 |
Y14520 |
Brocchi et al., 1997 |
|
|
|
|
|
|
|
|
Greece |
SVDV-1 |
GRE/1/79 |
CG(p) |
6938 |
KT284980 |
Bruhn et al., 2015 |
|
VP1(p) |
785 |
AJ004614 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004567 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250555 |
Hakhverdyan
et al.,
2006 |
|
|
|
|
|
|
|
|
Hong
Kong |
SVDV-1 |
HK '70 |
CG |
7401 |
AY429470 |
Ye et al., unpublished |
|
SVDV-1 |
HKN/19/70 |
CG(p) |
6939 |
KT284996 |
Bruhn et al., 2015 |
|
5'UTR(p) |
682 |
AY875993 |
Shaw
et al., 2005 |
|
VP1(p) |
819 |
AJ004615 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004568 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/36/71 |
CG(p) |
6894 |
KT284998 |
Bruhn et al., 2015 |
|
VP1(p) |
816 |
AJ004616 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004569 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/53/71 |
VP1(p) |
831 |
AJ004617 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004570 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/11/72 |
CG(p) |
6938 |
KT285000 |
Bruhn et al., 2015 |
|
VP1(p) |
814 |
AJ004618 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004571 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250561 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
HKN/19/72 |
VP1(p) |
818 |
AJ004619 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004572 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/8/73 |
VP1(p) |
821 |
AJ004620 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004573 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250551 |
Hakhverdyan et al.,
2006 |
|
CG(p) |
6938 |
KF963276 |
Nielsen et al., 2014 |
|
SVDV-1 |
HKN/6/74 |
VP1(p) |
831 |
AJ004621 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004574 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/18/74 |
VP1(p) |
829 |
AJ004622 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004575 |
Zhang et al., 1999 |
|
CG(p) |
6938 |
KF963277 |
Nielsen et al., 2014 |
|
SVDV-1 |
HKN/25/75 |
VP1(p) |
827 |
AJ004623 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004576 |
Zhang et al., 1999 |
|
CG(p) |
6938 |
KF963278 |
Nielsen et al., 2014 |
|
SVDV-1 |
HKN/1/76 |
VP1(p) |
827 |
AJ004624 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004577 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/1/77 (1976) |
VP1(p) |
825 |
AJ004625 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004578 |
Zhang et al., 1999 |
|
CG(p) |
6938 |
KF963274 |
Nielsen et al., 2014 |
|
SVDV-1 |
HKN/5/77 (1976) |
VP1(p) |
822 |
AJ004626 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004579 |
Zhang et al., 1999 |
|
CG(p) |
6938 |
KF963275 |
Nielsen
et al., 2014 |
|
SVDV-1 |
HKN/34/77 |
VP1(p) |
568 |
AJ004627 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004580 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/1/80 (1979) |
CG(p) |
6912 |
KT284983 |
Bruhn et al., 2015 |
|
5'UTR(p) |
655 |
AY876000 |
Shaw
et al., 2005 |
|
VP1(p) |
634 |
AJ004628 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004581 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250553 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
HKN/3/81 (1980) |
5'UTR(p) |
680 |
AY875994 |
Shaw
et al., 2005 |
|
VP1(p) |
812 |
AJ004629 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004582 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/7/81 |
CG(p) |
6938 |
KT284984 |
Bruhn et al., 2015 |
|
VP1(p) |
810 |
AJ004630 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004583 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/11/81 |
VP1(p) |
827 |
AJ004631 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004584 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250554 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
HKN/1/82 (1981) |
CG(p) |
6938 |
KT284985 |
Bruhn et al., 2015 |
|
5'UTR(p) |
681 |
AY875987 |
Shaw
et al., 2005 |
|
VP1(p) |
828 |
AJ004632 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004585 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/5/85 (1984) |
CG(p) |
6939 |
KT284986 |
Bruhn
et al., 2015 |
|
VP1(p) |
835 |
AJ004633 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004586 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/19/85 |
CG(p) |
6939 |
KT284987 |
Bruhn et al., 2015 |
|
VP1(p) |
824 |
AJ004634 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004587 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/12/87 |
CG(p) |
6938 |
KT284988 |
Bruhn et al., 2015 |
|
VP1(p) |
732 |
AJ004635 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004588 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/18/87 |
5'UTR(p) |
681 |
AY875990 |
Shaw
et al., 2005 |
|
VP1(p) |
830 |
AJ004636 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004589 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/24/88 |
VP1(p) |
534 |
AJ004637 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004590 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/1/89 |
5'UTR |
681 |
AY875988 |
Shaw
et al., 2005 |
|
3D(p) |
417 |
DQ250552 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
HKN/3/89 |
5'UTR(p) |
681 |
AY875989 |
Shaw
et al., 2005 |
|
VP1(p) |
348 |
AJ004638 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004591 |
Zhang et al., 1999 |
|
SVDV-1 |
HKN/4/89 |
CG(p) |
6939 |
KT285002 |
Bruhn
et al.,
2015 |
|
SVDV-1 |
HKN/3/91 |
CG(p) |
6937 |
KT285001 |
Bruhn
et al., 2015 |
|
VP1(p) |
510 |
AJ004639 |
Zhang et al., 1999 |
|
|
|
|
|
|
|
|
Italy |
SVDV-1 |
ITL/1/66
(IAH) |
CG(p) |
6937 |
KT284997 |
Bruhn
et al.,
2015 |
|
5'UTR(p) |
680 |
AY875992 |
Shaw
et al., 2005 |
|
VP1(p) |
830 |
Y14464 |
Brocchi et al., 1997 |
|
3BC |
658 |
AJ004592 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250550 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
ITL/1/66 (CISA-INIA) |
3D(p) |
417 |
DQ250560 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
ITL 72 |
3D(p) |
417 |
DQ250557 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
ITL/2/73 (1972) |
VP1(p) |
809 |
Y14465 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004593 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/3/73 (1972) |
CG(p) |
6938 |
KT285004 |
Bruhn
et al.,
2015 |
|
SVDV-1 |
ITL/5/77 |
CG(p) |
6939 |
KT285005 |
Bruhn
et al.,
2015 |
|
SVDV-1 |
ITL/A/89
(R967/Italy/88) |
CG(p) |
6938 |
KT284990 |
Bruhn
et al., 2015 |
|
VP1(p) |
827 |
Y14466 |
Brocchi et al., 1997 |
|
3BC |
642 |
AJ004594 |
Zhang et al., 1999 |
|
SVDV-1 |
R1004 (Italy/89) |
VP1(p) |
338 |
Y14467 |
Brocchi et al., 1997 |
|
SVDV-1 |
ITL/1/91 (R1042) |
CG(p) |
6938 |
KT284991 |
Bruhn
et al.,
2015 |
|
VP1(p) |
830 |
Y14468 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004595 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250549 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
ITL/2/91 (R1046) |
CG(p) |
6938 |
KT284992 |
Bruhn
et al.,
2015 |
|
VP1(p) |
638 |
Y14469 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004596 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/1/92 (R1058) |
5'UTR(p) |
681 |
AY875998 |
Shaw
et al., 2005 |
|
VP1(p) |
530 |
Y14470 |
Brocchi et al., 1997 |
|
3BC |
642 |
AJ004597 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250548 |
Hakhverdyan et al.,
2006 |
|
CG(p) |
7593 |
EU151450 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/2/92 (R1071) |
5'UTR(p) |
681 |
AY875991 |
Shaw
et al., 2005 |
|
VP1(p) |
214 |
Y14471 |
Brocchi et al., 1997 |
|
CG(p) |
7409 |
EU151454 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/6/92 |
CG(p) |
7406 |
EU151451 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/8/92 |
CG(p) |
7386 |
EU151452 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/18/92 |
CG(p) |
7382 |
EU151448 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/19/92 |
CG(p) |
7380 |
EU151455 |
Normann et al., unpub. |
|
5'UTR(p) |
681 |
AY875995 |
Shaw
et al., 2005 |
|
3D(p) |
417 |
DQ250547 |
Hakhverdyan
et al.,
2006 |
|
SVDV-1 |
ITL/20/92 |
5'UTR(p) |
681 |
AY875996 |
Shaw
et al., 2005 |
|
SVDV-1 |
ITL/7/93 (534/93) |
VP1(p) |
729 |
Y14472 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004598 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/8/93 (R1098) |
VP1(p) |
841 |
Y14473 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004599 |
Zhang et al., 1999 |
|
3D(p) |
417 |
DQ250559 |
Hakhverdyan
et al.,
2006 |
|
SVDV-1 |
ITL/9/93 (R1120) |
VP1(p) |
841 |
Y14474 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004600 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/10/93 (R1159) |
VP1(p) |
846 |
Y14475 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004601 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/12/93 (R1164) |
VP1(p) |
765 |
Y14476 |
Brocchi et al., 1997 |
|
3BC |
644 |
AJ004602 |
Zhang et al., 1999 |
|
SVDV-1 |
ITL/1/94 (R1174) |
VP1(p) |
204 |
Y14477 |
Brocchi et al., 1997 |
|
SVDV-1 |
ITL/2/94 (R1179) |
VP1(p) |
201 |
Y14478 |
Brocchi et al., 1997 |
|
SVDV-1 |
ITL/3/94 (R1185) |
VP1(p) |
201 |
Y14479 |
Brocchi et al., 1997 |
|
SVDV-1 |
ITL/4/94 (R1187) |
VP1(p) |
183 |
Y14480 |
Brocchi et al., 1997 |
|
SVDV-1 |
ITL/8/94 |
5'UTR(p) |
680 |
AY875997 |
Shaw
et al., 2005 |
|
3D(p) |
417 |
DQ250545 |
Hakhverdyan
et al.,
2006 |
|
SVDV-1 |
ITL/1/97 |
CG(p) |
7300 |
EU151456 |
Normann et al., unpub. |
|
5'UTR(p) |
595 |
AY876001 |
Shaw
et al., 2005 |
|
SVDV-1 |
ITL/2/97 |
CG(p) |
7328 |
EU151457 |
Normann et al., unpub. |
|
5'UTR(p) |
595 |
AY876002 |
Shaw
et al., 2005 |
|
SVDV-1 |
ITL/3/97 |
CG(p) |
7298 |
EU151449 |
Normann et al., unpub. |
|
5'UTR(p) |
595 |
AY876003 |
Shaw
et al., 2005 |
|
3D(p) |
417 |
DQ250546 |
Hakhverdyan
et al.,
2006 |
|
SVDV-1 |
ITL/10/98 |
CG(p) |
7385 |
EU151458 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/1/99 |
CG(p) |
7389 |
EU151459 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/3/99 |
CG(p) |
7382 |
EU151460 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/5/99 |
CG(p) |
7409 |
EU151461 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/7/99 |
CG(p) |
7395 |
EU151453 |
Normann et al., unpub. |
|
SVDV-1 |
ITL/13/99 |
5'UTR(p) |
595 |
AY876004 |
Shaw et al.,
2005 |
|
SVDV-1 |
ITL/10/2003 |
5'UTR(p) |
685 |
AY876007 |
Shaw
et al., 2005 |
|
SVDV-1 |
ITL/16/2006 |
CG(p) |
6933 |
KT284993 |
Bruhn
et al.,
2015 |
|
|
|
|
|
|
|
|
Japan |
SVDV-1 |
J1'73 (Ibaraki/Japan/73) |
CG |
7401 |
D16364 |
Inoue et al., 1993 |
|
SVDV-1 |
H3'76 (Hokkiado/Japan/76) |
CG |
7400 |
D00435 |
Inoue et al., 1989 |
|
|
|
|
|
|
|
|
Malta |
SVDV-1 |
MTA/22/75 |
CG(p) |
6938 |
KT284989 |
Bruhn
et al., 2015 |
|
VP1(p) |
812 |
AJ004640 |
Zhang et al., 1999 |
|
3BC |
643 |
AJ004603 |
Zhang et al., 1999 |
|
|
|
|
|
|
|
|
Netherlands |
SVDV-1 |
NET/1/75 |
VP1(p) |
829 |
Y14481 |
Brocchi et al., 1997 |
|
3BC |
642 |
AJ004604 |
Zhang et al., 1999 |
|
SVDV-1 |
NET/1/92 |
CG |
7406 |
AF268065 |
Rebel et al., 2000 |
|
SVDV-1 |
NET/2/92 |
VP1(p) |
554 |
Y14482 |
Brocchi et al., 1997 |
|
SVDV-1 |
NET/3/92 |
5'UTR(p) |
681 |
AY875999 |
Shaw et al., 2005 |
|
3D(p) |
417 |
DQ250544 |
Hakhverdyan et al.,
2006 |
|
SVDV-1 |
NL 92 |
VP1(p) |
256 |
Y14483 |
Brocchi et al., 1997 |
|
SVDV-1 |
NET/1/94 |
VP1(p) |
575 |
Y14510 |
Brocchi et al., 1997 |
|
SVDV-1 |
NET/2/94 |
VP1(p) |
310 |
Y14511 |
Brocchi et al., 1997 |
|
SVDV-1 |
NET/3/94 |
VP1(p) |
283 |
Y14512 |
Brocchi et al., 1997 |
|
SVDV-1 |
NET/4/94 |
VP1(p) |
257 |
Y14513 |
Brocchi et al., 1997 |
|
|
|
|
|
|
|
|
Poland |
SVDV-1 |
POL/1/73 (1972) |
CG(p) |
6938 |
KT284995 |
Bruhn
et al.,
2015 |
|
|
|
|
|
|
|
|
Portugal |
SVDV-1 |
POR/3/95 |
5'UTR(p) |
560 |
AY876010 |
Shaw et al., 2005 |
|
SVDV-1 |
POR/1/2003 |
5'UTR(p) |
652 |
AY876005 |
Shaw et al., 2005 |
|
3D(p) |
417 |
DQ250543 |
Hakhverdyan et al.,
2006 |
|
|
|
|
|
|
|
|
Romania |
SVDV-1 |
ROM/1/73 |
VP1(p) |
181 |
Y14514 |
Brocchi et al., 1997 |
|
SVDV-1 |
ROM/1/87 |
VP1(p) |
849 |
Y14515 |
Brocchi et al., 1997 |
|
|
|
|
|
|
|
|
Spain |
SVDV-1 |
SPA/1/93 |
5'UTR(p) |
680 |
AY876006 |
Shaw et al., 2005 |
|
VP1(p) |
825 |
Y14516 |
Brocchi et al., 1997 |
|
P1 |
2553 |
AF039166 |
Jimenez-Clavero et al.,
1998 |
|
3D(p) |
417 |
DQ250562 |
Hakhverdyan et al.,
2006 |
|
CG(p) |
6722 |
KU291213 |
Vazquez-Calvo et al.,
2016 |
|
SVDV-1 |
SPA/2/93 |
P1 |
2553 |
AY157625 |
Escribano-Romero et al.,
unpub. |
|
|
|
|
|
|
|
|
Switzerland |
SVDV-1 |
SWI/1/74 (1973) |
5'UTR(p) |
681 |
AY875985 |
Shaw
et al., 2005 |
|
3D(p) |
417 |
DQ250542 |
Hakhverdyan
et al.,
2006 |
|
|
|
|
|
|
|
|
Taiwan |
SVDV-1 |
TAW/119/97 |
CG(p) |
6937 |
KT285003 |
Bruhn
et al.,
2015 |
|
5'UTR(p) |
680 |
AY876008 |
Shaw
et al., 2005 |
|
SVDV-1 |
TAW/1/98 |
5'UTR(p) |
674 |
AY876009 |
Shaw
et al., 2005 |
|
SVDV-1 |
TN1/TAW/99 |
VP1 |
849 |
AB716937 |
Pan et al., unpub. |
|
3D(p) |
579 |
AB716935 |
Pan et al., unpub. |
|
SVDV-1 |
TW/99 |
VP2(p) |
291 |
FJ428231 |
Chen et al., unpub. |
|
VP1(p) |
417 |
FJ409085 |
Chen et al., unpub. |
|
3D(p) |
579 |
AB716936 |
Pan et al., unpub. |
|
SVDV-1 |
TN2 (Taiwan) |
VP1 |
849 |
AF121268 |
Wu et al., unpub. |
|
|
|
|
|
|
|
|
United
Kingdom |
SVDV-1 |
UKG/27/72* (Stafford) |
CG |
7400 |
X54521 |
Seechurn et al., 1990 |
|
CG |
7401 |
MK038999 |
Bravo de Rueda et al.,
unpub. |
|
3D(p) |
417 |
DQ250558 |
Hakhverdyan
et al.,
2006 |
|
SVDV-1 |
UKG/308/73 (Stockport) |
CG(p) |
6938 |
KT284981 |
Bruhn
et al., 2015 |
|
|
|
|
|
|
|
|
USSR |
SVDV-1 |
O72 (Odessa 1972) |
VP1(p) |
810 |
KT006373 |
Lomakina et al.,
2015 |
|
3D |
1498 |
AJ245863 |
Lomakina et al.,
unpublished |
|
SVDV-1 |
USS/6/72 (O72) |
CG(p) |
6938 |
KT284982 |
Bruhn
et al.,
2015 |
|
|
*, prototype strain |
|
|
|