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Unassigned
 

Genus: Enterovirus

Species: Enterovirus C

Serotype: Coxsackievirus A1 (CVA1)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A11 (CVA11)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A13 (CVA13)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A17 (CVA17)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A19 (CVA19)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A20 (CVA20)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A21 (CVA21)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A22 (CVA22)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Coxsackievirus A24 (CVA24)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C95 (EV-C95)
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C96 (EV-C96)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C99 (EV-C99)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C102 (EV-C102)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C104 (EV-C104)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C105 (EV-C105)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C109 (EV-C109)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C113 (EV-C113)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C116 (EV-C116)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C117 (EV-C117)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: Enterovirus C118 (EV-C118)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
     

(White areas indicate genes which haven't yet been sequenced completely;
grey areas are where only partial sequences exist)

References

Virus Strain Region

Length

Accession No.

 Reference Comments

Coxsackievirus A1 (CVA1)
CVA1 T.T. (Tompkins)* (Coxsackie, NY/47) 5'NCR(p),1AB(p),3'NCR(p) 199,210,57 X87584 Pulli et al., 1995  
VP1 888

AF081293

 Oberste et al., 1999  
CG 7397 AF499635 Brown et al., 2003  
CVA1 BBD34 (Bangladesh, 2009) CG(p) 7258 KC785529 Tokarz et al., 2013 end missing
             

Coxsackievirus A11 (CVA11)
CVA11 Belgium 1* (Belgium/51) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87592 Pulli et al., 1995  
VP1 912 AF081301 Oberste et al., 1999  
CG 7453 AF499636 Brown et al., 2003  
CVA11 G-9* (South Africa/50)
(formerly CVA15)		 5'NCR(p),3D(p),3'NCR(p) 199,387,55 X87596 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 912 AF081305 Oberste et al., 1999  
CG 7441 AF499638 Brown et al., 2003  
CG 7441 AF465512 Newcombe et al., 2003  
             

Coxsackievirus A13 (CVA13)
CVA13 Flores* (Mexico/52) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87594 Pulli et al., 1995  
VP1 927 AF081303 Oberste et al., 1999  
CG 7458 AF499637 Brown et al., 2003  
CG 7458 AF465511 Newcombe et al., 2003  
CVA13 G-13* (South Africa/50)
(formerly CVA18)		 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87598 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 927 AF081307 Oberste et al., 1999  
CG 7458 AF499640 Brown et al., 2003  
CG 7457 AF465513 Newcombe et al., 2003  
CVA13 BAN00-10494 CG 7457 DQ995639 Brown et al., 2009  
             

Coxsackievirus A17 (CVA17)
CVA17 G-12* (South Africa/51) 5'NCR(p),1AB(p),3D(p),3'NCR(p) 199,210,387,55 X87597 Pulli et al., 1995  
VP1 918 AF081306 Oberste et al., 1999  
CG 7457 AF499639 Brown et al., 2003  
             

Coxsackievirus A19 (CVA19)
CVA19 NIH-8663 (Dohi)* (Japan/52) 3D(p),3'NCR(p) 387,57 X87599 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 888 AF081308 Oberste et al., 1999  
CG 7410 AF499641 Brown et al., 2003  
CVA19 BBD26 (Bangladesh, 2009) CG(p) 7285 KC785531 Tokarz et al., 2013 ends missing
CVA19 BBD66 (Bangladesh, 2009) CG(p) 7364 KC785532 Tokarz et al., 2013 ends missing
             

Coxsackievirus A20 (CVA20)
CVA20 IH-35* (New York/55) 5'NCR(p),1AB(p),3D(p) 199,210,387 X87600 Pulli et al., 1995  
VP1 909 AF081309 Oberste et al., 1999  
CG 7436 AF499642 Brown et al., 2003  
CG 7436 AF465514 Newcombe et al., 2003  
CVA20a Tulane 1623 (Louisiana/51) 5'NCR(p),3D(p) 200,387 X87601 Pulli et al., 1995  
CVA20b Cecil P2647 (South Africa/51) 5'NCR(p),1AB(p),3D(p) 198,210,387 X87602 Pulli et al., 1995  
CVA20 BAN01-10618 CG 7441 EF015014 Brown et al., 2009  
             

Coxsackievirus A21 (CVA21)
CVA21 Coe (California/54) CG 7401 D00538 Hughes et al., 1989  
5' NCR(p) 260 AF068880
 AF076999		 Muir et al., unpublished  
CVA21 Kuykendall* (California/52) CG 7406 AF546702 Brown et al., 2003  
CG 7405 AF465515 Newcombe et al., 2003  
CVA21 272101 P1 2637 AY319942 Newcombe et al., 2004  
CVA21 275238 P1 2637 AY319943 Newcombe et al., 2004  
CVA21 272598 P1 2637 AY319944 Newcombe et al., 2004  
CVA21 BAN00-10467 CG 7440 EF015031 Brown et al., 2009  
             

Coxsackievirus A22 (CVA22)
CVA22 Chulman* (New York/55) 5'NCR(p),3D(p),3'NCR(p) 197,387,57 X87603 Pulli et al., 1995  
VP2(p) ? ? Oberste et al., 1998  
VP1 888 AF081310 Oberste et al., 1999  
CG 7406 AF499643 Brown et al., 2003  
CVA22 USA75-10624 CG 7402 DQ995648 Brown et al., 2009  
CVA22 BBD01 (Bangladesh, 2009) CG(p) 7284 KC785528 Tokarz et al., 2013 ends missing
CVA22 BBD58 (Bangladesh, 2009) CG(p) 7265 KC785530 Tokarz et al., 2013 ends missing
             

Coxsackievirus A24 (CVA24)
CVA24 Joseph* 5' NCR(p) 255 AF068881 Muir et al., unpublished  
VP2(p) ? ? Oberste et al., 1998  
VP1 915 AF081311 Oberste et al., 1999  
CVA24' DN-19 VP2(p) ? ? Oberste et al., 1998  
VP1 915 AF081347 Oberste et al., 1999  
CVA24v EH 24/70 (Singapore/70) CG 7461 D90457 Supanaranond et al., 1992  
             

Enterovirus C95 (EV-C95)
EV-C95 5-05* VP1   N/A Norder et al., unpublished  
EV-C95 T08-083/Chad/2008 VP1 894 JX417822 Sadeuh-Mba et al., 2013  
EV-C95 T08-234/Chad/2008 VP1 894 JX417823 Sadeuh-Mba et al., 2013  
             

Enterovirus C96 (EV-C96)
EV-C96 SVK03-24 VP1 927 EF364404 Smura et al., 2007  
3D(p) 459 EF364411 Smura et al., 2007  
EV-C96 10488 VP1 927 AY919472 Oberste et al., 2006  
EV-C96 BAN00-10488* CG 7478 EF015886 Brown et al., 2009  
EV-C96 10548c VP1(p) 477 AY919538 Oberste et al., 2006  
EV-C96 FIN04-7 CG 7475 FJ751914 Smura et al., 2009  
EV-C96 FIN05-2 CG 7471 FJ751915 Smura et al., 2009  
EV-C96 AFP809/GD/CHN/2011 CG 7469 KF495604 Lu et al., 2014  
             

Enterovirus C99 (EV-C99)
EV-C99 10461-ban00* VP1 909 AY919447 Oberste et al., 2006  
EV-C99 USA-GA84-10636 CG 7447 EF555644 Brown et al., 2009  
EV-C99 HT-XEBGH09F/XJ/CHN/2011 CG 7455 KF129411 Sun et al., 2013  
EV-C99 KSSC-ALXHH01F/XJ/CHN/2011 CG 7455 KF129412 Sun et al., 2013  
             

Enterovirus C102 (EV-C102)
EV-C102 10424-BAN99* VP1 909 AY919409 Oberste et al., 2006  
EV-C102 BAN99-10424* CG 7438 EF555645 Brown et al., 2009  
             

Enterovirus C104 (EV-C104)
EV-C104 CL-1231094 FL* CG(p) 7229 EU840733 Tapparel et al., 2009 3' end missing
EV-C104 AK11 (Japan:Osaka City, Feb-2011) CG 7408 AB686524 Kaida et al., 2012  
EV-C104 Pavia259-7712 (Italy, 2009) CG 7409 JX982253 Piralla et al., 2013  
EV-C104 Pavia260-9210 (Italy, 2009) CG 7409 JX982254 Piralla et al., 2013  
EV-C104 Pavia263-11230 (Italy, 2009) CG 7409 JX982255 Piralla et al., 2013  
EV-C104 Pavia264-16291 (Italy, 2009) CG 7409 JX982256 Piralla et al., 2013  
EV-C104 Pavia261-9570 (Italy, 2009) CG 7409 JX982257 Piralla et al., 2013  
EV-C104 Pavia68-10804B (Italy, 2009) CG 7409 JX982258 Piralla et al., 2013  
EV-C104 Pavia262-11228 (Italy, 2009) CG 7409 JX982259 Piralla et al., 2013
EV-C104 GAM693 (Gambia, 2009) CG(p) 7067 KC785523 Tokarz et al., 2013 ends missing
EV-C104 GAM714 (Gambia, 2009) CG(p) 7332 KC785524 Tokarz et al., 2013 ends missing
             

Enterovirus C105 (EV-C105)
EV-C105 TW/NTU07-1841* VP1   N/A Cheng et al., unpublished  
EV-C105 34S/DRC/2010 CG 7299 JX514943 Lukashev et al., 2012  
EV-C105 PER153 (Peru, 2010) CG(p) 7309 JX393302 Tokarz et al., 2012  
EV-C105 BU5 (Burundi, 2010) VP1(p) 323 JQ317291 Esposito et al., 2010  
EV-C105 BU77 (Burundi, 2010) VP1(p) 325 JQ317292 Esposito et al., 2010  
EV-C105 ROM31 (Romania, 2010) VP1(p) 325 JQ317293 Esposito et al., 2010  
EV-C105 CY135/Cyprus/2012 5'UTR(p)+VP4+VP2(p) 1045 KF322115 Richter et al., 2013  
VP1 973 KF322116 Richter et al., 2013  
             

Enterovirus C109 (EV-C109)
EV-C109 NICA08-4327* CG 7354 GQ865517 Yozwiak et al., 2010  
EV-C109 L87/HUN/2007 CG 6912 JN900470 Pankovics et al., 2012  
             

Enterovirus C113 (EV-C113
EV-C113 BAN-11609* VP1   n/a Oberste et al., unpub.  
EV-C113 BAN/2008/14800 VP1(p) 311 JX538208 Oberste et al., 2013  
EV-C113 BBD-48/Bangladesh/2009 CG(p) 7318 KC344833 Tokarz et al., 2013  
EV-C113 BBD-83/Bangladesh/2009 CG(p) 7335 KC344834 Tokarz et al., 2013  
             

Enterovirus C116 (EV-C116)
EV-C116 126/Russia/2010* CG 7395 JX514942 Lukashev et al., 2012  
             

Enterovirus C117 (EV-C117)
EV-C117 LIT22/Vilnius, Lithuania/2011* P1 2634 JQ446368 Daleno et al., 2012  
CG 7363 JX262382 Daleno et al., 2012  
EV-C117 BCH096A/China, 2007 CG(p) 7196 JX560527 Xiang & Wang, unpub.  
             

Enterovirus C118 (EV-C118)
EV-C118 ISR10* (Israel/2011) VP1 891 JQ768163 Daleno et al., 2013a
EV-C118 ISR10* (Israel/2011) CG 7357 JX961708 Daleno et al., 2013b  
EV-C118 ISR38 (Israel/2011) CG 7357 JX961709 Daleno et al., 2013b  
EV-C118 PER161 (Peru, 2010) CG(p) 7299 JX393301 Tokarz et al., 2012  
EV-C118 CQ5185 (China: Chongqing, 2011) CG 7374 JX678288 Lu et al., unpub.
             
CG, complete genome
(p), partial gene sequence
*, prototype strain

References