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Pages		  EV-J seqs

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Genus: Enterovirus

Species: Enterovirus J

Serotype: enterovirus J103 (EV-J103)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: enterovirus J108 (EV-J108)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: enterovirus J112 (EV-J112)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: enterovirus J115 (EV-J115)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: enterovirus J121 (EV-J121)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
Serotype: enterovirus J122 (EV-J122)  
5' UTR VP4 VP2 VP3 VP1 2A 2B 2C 3A 3B 3C 3D 3' UTR
     

(White areas indicate genes which haven't yet been sequenced completely;
grey areas are where only partial sequences exist)
Virus Strain Host Region

Length

Accession No.

 Reference Comments

Enterovirus J103 (EV-J103)
EV-J103 USA/GA99-POo-1 Macaca nemestrina CG 7355 FJ007373 Oberste et al., 2008  
VP1(p) 285 EU194518 Nix et al., 2008  
3D(p) 624 EU194492 Nix et al., 2008  
EV-J103 USA/GA99-PQe Macaca nemestrina VP1(p) 233 EU194543 Nix et al., 2008  
EV-J103 USA/GA99-RBj-5 Macaca mulatta VP1(p) 303 EU194544 Nix et al., 2008  
EV-J103 RhMk/cg938/USA/2014 Macaca mulatta VP1(p)-2C(p) 1260 KT961639 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg4108/USA/2014 Macaca mulatta VP2(p)-VP1(p) 1302 KT961641 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg5277/USA/2014 Macaca mulatta VP4-VP3(p) 1211 KT961642 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg8217/USA/2014 Macaca mulatta VP1(p)-3D(p) 4453 KT961651 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg5275/USA/2014 Macaca mulatta VP3(p)-3D(p) 5025 KT961652 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg8227/USA/2014 Macaca mulatta CG(p) 7004 KT961656 Kapusinszky et al., unpub.  
EV-J103 RhMk/cg3697/USA/2014 Macaca mulatta CG(p) 7093 KT961657 Kapusinszky et al., unpub.  
               

Enterovirus J108 (EV-J108)
EV-J108 N125 Papio cynocephalus 5'NCR(p) 287 n/a N.J. Knowles and F. Lin, unpub.  
CG 7383 AF414372 Oberste et al., 2002;
Oberste et al., 2007		  
3D(p) 454 n/a N.J. Knowles and F. Lin, unpub.  
EV-J108 N203 Papio cynocephalus 5'NCR(p) 309 n/a N.J. Knowles and F. Lin, unpub.  
CG 7379 AF414373 Oberste et al., 2002;
Oberste et al., 2007
3D(p)  450 n/a N.J. Knowles and F. Lin, unpub.  
               

Enterovirus J112 (EV-J112)
EV-J112 BAN-11217 Papio anubis VP1  852 n/a Oberste et al., unpub.
               

Enterovirus J115 (EV-J115)
EV-J115 BAN-11617 Macaca mulatta VP1 870 n/a Oberste et al., unpub.  
               

Enterovirus J121 (EV-J121)
EV-J121 CPZ_CHE20/Cameroon/2007 wild chimpanzee VP3(p)+VP1+2A(p) 1680 KF541639 Sadeuh-Mba et al., 2014  
3D(p) 966 KF648606 Sadeuh-Mba et al., 2014  
5'NCR(p) 358 KF614477 Sadeuh-Mba et al., 2014  
               

Enterovirus J122 (EV-J122) [formerly simian virus 6 (SV6)]
EV-J122 SV6-1631 Macaca mulatta 5'NCR(p) 426 EF364417 Pöyry et al., 1999;
 Smura et al., 2007		  
CG 7351 AF326766 Oberste et al., 2002;
Oberste et al., 2007		  
3D(p) 489 n/a Pöyry et al., 1999  
EV-J122 USA/GA99-FWv Cercocebus atys VP1(p) 297 EU194541 Nix et al., 2008
               

Enterovirus J (EV-J) candidate new type
EV-J rhmk/Sev-nj1/China/2013 Macaca mulatta CG(p) 7298 KT581587 Wang et al., 2016  
               

Enterovirus J (EV-J) untyped
EV-J agm/CHN/BJ/2018-1J Chlorocebus sabaeus CG(p) 7336 MN427526 Li et al., 2020  
EV-J agm/CHN/BJ/2018-2J Chlorocebus sabaeus CG(p) 7336 MN865119 Li et al., 2020  
EV-J agm/CHN/BJ/2018-8J Chlorocebus sabaeus CG(p) 7333 MN427527 Li et al., 2020  
EV-J agm/CHN/BJ/2018-9J Chlorocebus sabaeus CG(p) 7319 MN427528 Li et al., 2020  
EV-J agm/CHN/BJ/2018-10J Chlorocebus sabaeus CG(p) 7339 MN865120 Li et al., 2020  
EV-J rhmk/NOLA-1/USA/2016 Macaca mulatta CG(p) 7316 MZ312496 Zhao et al., 2019; Mihindukulasuriya et al., 2021  
EV-J rhmk/NOLA-3/USA/2016 Macaca mulatta CG(p) 7244 MZ312494 Zhao et al., 2019; Mihindukulasuriya et al., 2021  
               
CG, complete genome
(p), partial gene sequence
n/a, not available
Cercocebus atys (sooty mangabey)
Macaca mulatta (rhesus macaque)
Macaca nemestrina (southern pig-tailed macaque)
Papio anubis (olive baboon)
Papio cynocephalus (yellow baboon)
 

References

Li W, Qiang X, Qin S, Huang Y, Hu Y, Bai B, Hou J, Gao R, Zhang X, Mi Z, Fan H, Ye H, Tong Y, Mao P. Virome diversity analysis reveals novel enteroviruses and a human picobirnavirus in stool samples from African green monkeys with diarrhea. Infect Genet Evol. 2020 Aug;82:104279. doi: 10.1016/j.meegid.2020.104279. Epub 2020 Mar 10. PMID: 32165243; PMCID: PMC7102571.

Mihindukulasuriya KA, Droit L, Gilbert MH, Didier PJ, Paredes A, Handley SA, Bohm RP, Wang D. Divergent Enteroviruses from Macaques with Chronic Diarrhea. Microbiol Resour Announc. 2021 Aug 5;10(31):e0069921. doi: 10.1128/MRA.00699-21. Epub 2021 Aug 5. PMID: 34351224.

Zhao G, Droit L, Gilbert MH, Schiro FR, Didier PJ, Si X, Paredes A, Handley SA, Virgin HW, Bohm RP, Wang D. Virome biogeography in the lower gastrointestinal tract of rhesus macaques with chronic diarrhea. Virology. 2019 Jan 15;527:77-88. doi: 10.1016/j.virol.2018.10.001. Epub 2018 Nov 20. PMID: 30468938; PMCID: PMC6333316.

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