|
|
| |
Genus: Rhinovirus
Species: Enterovirus
alpharhino
| Serotype: rhinovirus A1 (RV-A1) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A2 (RV-A2) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A7 (RV-A7) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A8 (RV-A8) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A9 (RV-A9) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A10 (RV-A10) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A11 (RV-A11) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A12 (RV-A12) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A13 (RV-A13) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A15 (RV-A15) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A16 (RV-A16) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A18 (RV-A18) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A19 (RV-A19) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A20 (RV-A20) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A21 (RV-A21) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A22 (RV-A22) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A23 (RV-A23) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A24 (RV-A24) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A25 (RV-A25) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A28 (RV-A28) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A29 (RV-A29) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A30 (RV-A30) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A31 (RV-A31) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A32
(RV-A32) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A33 (RV-A33) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A34 (RV-A34) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A36 (RV-A36) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A38 (RV-A38) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A39 (RV-A39) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A40
(RV-A40) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A41 (RV-A41) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus A43 (RV-A43) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A45 (RV-A45) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A46
(RV-A46) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A47 (RV-A47) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A49 (RV-A49) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A50 (RV-A50) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A51 (RV-A51) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A53 (RV-A53) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A54 (RV-A54) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A55 (RV-A55) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A56 (RV-A56) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A57
(RV-A57) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A58 (RV-A58) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A59 (RV-A59) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A60 (RV-A60) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A61 (RV-A61) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A62 (RV-A62) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A63 (RV-A63) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A64 (RV-A64) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A65 (RV-A65) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A66 (RV-A66) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A67 (RV-A67) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A68 (RV-A68) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A71 (RV-A71) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A73 (RV-A73) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A74 (RV-A74) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A75 (RV-A75) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A76 (RV-A76) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A77 (RV-A77) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A78 (RV-A78) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A80
(RV-A80) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A81
(RV-A81) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A82
(RV-A82) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A85 (RV-A85) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A88
(RV-A88) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype: rhinovirus A89 (RV-A89) |
|
| 5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A90
(RV-A90) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A94
(RV-A94) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A96
(RV-A96) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A100
(RV-A100) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A101
(RV-A101) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A102
(RV-A102) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A103
(RV-A103) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A104
(RV-A104) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A105
(RV-A105) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A106
(RV-A106) |
|
|
5'
UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| Serotype:
rhinovirus
A107
(RV-A107) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Serotype:
rhinovirus
A108
(RV-A108) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Serotype:
rhinovirus
A109 (RV-A109) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely; grey areas are where only partial sequences
exist)
References
| Virus |
Strain |
Region |
Length |
Accession
No. |
Reference |
Comments |
Rhinovirus A1 (RV-A1) |
| RV-A1A |
2060 (Ohio)
(ATCC VR-1559) |
CG |
|
FJ445111 |
Palmenberg et al.,
2009 |
|
| 5' UTR+P1 |
3125 |
download |
G. Cordova, unpub.(also
see: Kim et al., 1989) |
|
| VP4+VP2(p) |
420 |
AF343633 |
Savolainen et al., 2002 |
|
| VP3(p)+VP1+2A(p) |
1356 |
AY458604 |
Laine et al.,
unpublished |
|
|
VP1 |
861 |
AY355181 |
Ledford et al.,
unpub. |
|
| 3B |
63 |
M12166 |
Werner et al.,
1986 |
|
| 3A-3C |
1206 |
M12169 |
Werner et al., 1986;
Aschauer et al., 1991 |
see also:
M73790 |
| 3D(p) |
468 |
AY436674 |
Savolainen et al., unpublished |
|
| RV-A1B
|
B632 |
CG |
7133 |
D00239 |
Hughes et al.,
1988 |
|
| 5'UTR(p) |
259 |
Z29656 |
Mori and Clewley, 1994 |
|
|
VP1 |
861 |
AY355182 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436673 |
Savolainen et al., unpublished |
|
Rhinovirus A2 (RV-A2) |
| RV-A2
|
HGP |
CG |
7102 |
X02316 |
Skern et al.,
1985 |
|
|
VP1 |
849 |
AY355183 |
Ledford et al.,
unpub. |
|
| RV-A2 |
CA90-0150 |
VP1(p) |
307 |
AF152253 |
Oberste et al., 2000 |
|
Rhinovirus A7 (RV-A7) |
| RV-A7 |
68-CV11 |
CG |
7146 |
DQ473503 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z47564 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343589 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355188 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1374
|
AY450513
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436677 |
Savolainen et al., unpublished |
|
Rhinovirus A8 (RV-A8) |
| RV-A8 |
MRH-CV12
(ATCC VR-1118) |
CG |
|
FJ445113 |
Palmenberg et al.,
2009 |
|
|
VP4+VP2(p) |
420 |
AF343594 |
Savolainen et al., 2002 |
|
|
VP1 |
852 |
AY355189 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1357
|
AY450519
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436682 |
Savolainen et al., unpublished |
|
| RV-A8 |
SF-998 |
VP4+VP2(p) |
420 |
AF343595 |
Savolainen et al.,
2002 |
previously
designated as A95 |
|
VP1 |
852 |
AY355276 |
Ledford et al.,
unpub. |
|
VP3(p)+VP1+2A(p) |
1377
|
AY450522
|
Laine et al.,
unpub. |
| 3D(p) |
468 |
AY436683 |
Savolainen et al.,
unpublished |
Rhinovirus A9 (RV-A9) |
| RV-A9 |
211-CV13
(ATCC VR-489) |
CG |
7128 |
download |
Leckie, 1988 |
|
| CG |
7132 |
FJ445177 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AF343605 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355190 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450525
|
Laine et al., unpub. |
|
|
RV-A9 |
F01 |
CG |
7134 |
FJ445114 |
Palmenberg et al.,
2009 |
|
|
RV-A9 |
F02 |
CG |
7133 |
FJ445115 |
Palmenberg
et al.,
2009 |
|
Rhinovirus A10 (RV-A10) |
| RV-A10 |
204-CV14 |
CG |
7137 |
DQ473498 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343609 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355191 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1387
|
AY450464
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436659 |
Savolainen et al., unpublished |
|
Rhinovirus A11 (RV-A11) |
| RV-A11 |
1-CV15 |
CG |
7125 |
EF173414 |
Tapparel et al.,
2007 |
|
| VP2(p) |
327 |
Z47565 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343623 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355192 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1372
|
AY450465
|
Laine et al., unpub. |
|
Rhinovirus A12 (RV-A12) |
| RV-A12 |
181-CV16 |
CG |
7124 |
EF173415 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016405 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355193 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1236
|
AY450466
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436648 |
Savolainen et al., unpublished |
|
Rhinovirus A13 (RV-A13) |
| RV-A13 |
353 (South Carolina/59) |
CG |
7140 |
FJ445116 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AF343599 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355194 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1394
|
AY450467
|
Laine et al., unpub. |
|
| RV-A13 |
F03 (USA) |
CG |
7143 |
FJ445117 |
Palmenberg et al., 2009 |
|
Rhinovirus A15 (RV-A15) |
| RV-A15 |
1734 (South
Carolina/60) |
CG |
7134 |
DQ473493 |
Kistler et al.,
2007 |
|
| P1+2A(p) |
2612 |
download |
J. Margolis & B.E.
Clarke, unpub. |
|
| 5'UTR(p) |
254 |
Z29654 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343630 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355196 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1355
|
AY450468
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436669 |
Savolainen et al., unpublished |
|
Rhinovirus A16 (RV-A16) |
| RV-A16 |
11757 (Washington
DC/60) |
CG |
7124 |
L24917 |
Lee et al., 1994 |
|
| VP1 |
855 |
AY355197 |
Ledford et al.,
unpub. |
|
Rhinovirus A18 (RV-A18) |
| RV-A18 |
5986-CV17 |
CG |
7119 |
FJ445118 |
Palmenberg et al.,
2009 |
|
| VP4+VP2(p) |
420 |
AY016407 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355199 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1378
|
AY450469
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436651 |
Savolainen et al., unpublished |
|
Rhinovirus A19 (RV-A19) |
| RV-A19 |
6072-CV18 |
VP4+VP2(p) |
420 |
AF343632 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355200 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1384
|
AY450470
|
Laine et al., unpub. |
|
Rhinovirus A20 (RV-A20) |
| RV-A20 |
15-CV19 |
VP4+VP2(p) |
417 |
AF343644 |
Savolainen et al., 2002 |
|
|
VP1 |
891 |
AY355201 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1400
|
AY450471
|
Laine et al., unpub. |
|
Rhinovirus A21 (RV-A21) |
| RV-A21 |
47-CV21 |
VP2(p) |
336 |
Z47566 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343626 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355202 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1391
|
AY450472
|
Laine et al., unpub. |
|
| RV-A21 |
Hanks2102 |
VP4+VP2(p) |
416 |
AY040234 |
Savolainen et al., 2002 |
|
| VP1 |
861 |
AY355180 |
Ledford et al., unpub. |
95.7% match with
RV-A21 |
| VP3(p)+VP1+2A(p) |
1367
|
AY450462
|
Laine et al., unpub. |
|
Rhinovirus A22 (RV-A22) |
| RV-A22 |
127-CV22 |
VP4+VP2(p) |
420 |
AF343628 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355203 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1377
|
AY450473
|
Laine et al., unpub. |
|
Rhinovirus A23 (RV-A23) |
| RV-A23 |
5124-CV24 |
CG |
7025 |
DQ473497 |
Kistler et al., 2007 |
missing part of 5' UTR |
| VP4+VP2(p) |
420 |
AF343597 |
Savolainen et al., 2002 |
|
|
VP1 |
849 |
AY355204 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1321
|
AY450474
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436666 |
Savolainen et al., unpublished |
|
Rhinovirus A24 (RV-A24) |
| RV-A24 |
5146-CV25 |
CG |
7132 |
EF173416 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343619 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355205 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1378
|
AY450475
|
Laine et al., unpub. |
|
Rhinovirus A25 (RV-A25) |
| RV-A25 |
5426-CV26 |
VP4+VP2(p) |
420 |
AF343617 |
Savolainen et al., 2002 |
|
|
VP1 |
846 |
AY355206 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1349
|
AY450476
|
Laine et al., unpub. |
|
Rhinovirus A28 (RV-A28) |
| RV-A28
|
6101-CV29 |
CG |
7148 |
DQ473508 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016406 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355209 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1403
|
AY450477
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436678 |
Savolainen et al., unpublished |
|
Rhinovirus A29 (RV-A29) |
| RV-A29 |
5582-CV30 |
VP2(p) |
333 |
Z47567 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343615 |
Savolainen et al., 2002 |
|
| VP1 |
843 |
AY273202 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1315 |
AY458605 |
Laine et al.,
unpublished |
|
|
VP1 |
843 |
AY355210 |
Ledford et al.,
unpub. |
|
| RV-A29 |
71560 (North
Carolina/61) |
CG |
7123 |
DQ473499 |
Kistler et al.,
2007 |
previously designated as A44 |
| 5'UTR(p) |
254 |
Z29660 |
Mori and Clewley, 1994 |
| VP4+VP2(p) |
420 |
AF343616 |
Savolainen et al., 2002 |
| VP1 |
843 |
AY273203 |
Vlasak et al.,
2003 |
| VP3(p)+VP1+2A(p) |
1374 |
AY458608 |
Laine et al.,
unpublished |
|
VP1 |
843 |
AY355225 |
Ledford et al.,
unpub. |
Rhinovirus A30 (RV-A30) |
| RV-A30 |
106F |
CG |
7099 |
DQ473512 |
Kistler et al.,
2007 |
|
| 5'UTR(p) |
255 |
Z29657 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343596 |
Savolainen et al., 2002 |
|
| VP1 |
849 |
AY273205 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1382 |
AY458606 |
Laine et al.,
unpublished |
|
|
VP1 |
849 |
AY355211 |
Ledford et al.,
unpub. |
|
Rhinovirus A31 (RV-A31) |
| RV-A31 |
140F |
5'UTR(p) |
255 |
Z29658 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343583 |
Savolainen et al., 2002 |
|
| VP1 |
855 |
AY273200 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1328 |
AY458607 |
Laine et al.,
unpublished |
|
|
VP1 |
855 |
AY355212 |
Ledford et al.,
unpub. |
|
Rhinovirus A32 (RV-A32) |
| RV-A32 |
363 (South Carolina/59) |
VP4+VP2(p) |
418 |
AF343584 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355213 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1401
|
AY450478
|
Laine et al., unpub. |
|
Rhinovirus A33 (RV-A33) |
| RV-A33 |
1200 (South Carolina/59) |
VP4+VP2(p) |
420 |
AF343625 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355214 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1370
|
AY450479
|
Laine et al., unpub. |
|
Rhinovirus A34 (RV-A34) |
| RV-A34 |
137-3 |
CG |
7119 |
DQ473501 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343634 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355215 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1391
|
AY450480
|
Laine et al., unpub. |
|
Rhinovirus A36 (RV-A36) |
| RV-A36 |
342H |
CG |
7141 |
DQ473505 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z49123 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343588 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355217 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1405
|
AY450481
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436676 |
Savolainen et al., unpublished |
|
Rhinovirus A38 (RV-A38) |
| RV-A38 |
CH79 |
CG |
7136 |
DQ473495 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343614 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355219 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1386
|
AY450482
|
Laine et al., unpub. |
|
Rhinovirus A39 (RV-A39) |
| RV-A39 |
209 (Maryland/62) |
CG |
7137 |
AY751783 |
Harris and
Racaniello, 2005 |
|
| VP4+VP2(p) |
420 |
AF343637 |
Savolainen et al., 2002 |
|
| VP1 |
873 |
download |
G. Cordova, unpub. |
|
|
VP1 |
855 |
AY355220 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1345
|
AY450483
|
Laine et al., unpub. |
|
Rhinovirus A40 (RV-A40) |
| RV-A40 |
1794 (North Carolina/61) |
VP4+VP2(p) |
390 |
AF343641 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355221 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1379
|
AY450484
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436654 |
Savolainen et al., unpublished |
|
Rhinovirus A41 (RV-A41) |
| RV-A41 |
56110 (North
Carolina/61) |
CG |
7145 |
DQ473491 |
Kistler et al.,
2007 |
|
| 5'UTR(p) |
257 |
Z29659 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343600 |
Savolainen et al., 2002 |
|
|
VP1 |
873 |
AY355222 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1364
|
AY450485
|
Laine et al., unpub. |
|
Rhinovirus A43 (RV-A43) |
| RV-A43 |
58750 (North Carolina/61) |
VP4+VP2(p) |
420 |
AY040232 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355224 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1373
|
AY450486
|
Laine et al., unpub. |
|
Rhinovirus A44 (RV-A44): now designated as RV-A29
|
Rhinovirus A45 (RV-A45) |
| RV-A45 |
Tippett (Baylor 1) (Texas/64) |
VP4+VP2(p) |
420 |
AY016409 |
Savolainen et al., 2002 |
|
|
VP1 |
849 |
AY355226 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1358
|
AY450487
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436684 |
Savolainen et al., unpublished |
|
Rhinovirus A46 (RV-A46) |
| RV-A46 |
Crell (Baylor 2) (Texas/64) |
CG |
7149 |
DQ473506 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
419 |
AY040235 |
Savolainen et al., 2002 |
|
|
VP1 |
879 |
AY355227 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1369
|
AY450488
|
Laine et al., unpub. |
|
Rhinovirus A47 (RV-A47) |
| RV-A47 |
Calvert (Baylor 3) (Texas/63) |
VP4+VP2(p) |
420 |
AF343607 |
Savolainen et al., 2002 |
|
| VP1 |
855 |
AY273201 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1361 |
AY458609 |
Laine et al.,
unpublished |
|
|
VP1 |
855 |
AY355228 |
Ledford et al.,
unpub. |
|
| RV-A47 |
N13 (China 2007) |
CG |
7136 |
GQ223229 |
Huang et al., 2009 |
|
Rhinovirus A49 (RV-A49) |
| RV-A49 |
8213 |
CG |
7106 |
DQ473496 |
Kistler et al.,
2007 |
|
| VP2(p) |
336 |
Z47568 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343598 |
Savolainen et al., 2002 |
|
| VP1 |
849 |
download |
G. Cordova, unpub. |
|
| VP1 |
849 |
AY273206 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1368 |
AY458610 |
Laine et al.,
unpublished |
|
|
VP1 |
849 |
AY355230 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436665 |
Savolainen et al., unpublished |
|
Rhinovirus A50 (RV-A50) |
| RV-A50 |
A2-58 |
P1 |
2829 |
download |
Dan Pevear, Sterling
Winthrop, unpub. |
|
| VP2(p) |
336 |
Z47569 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343635 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355231 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1368
|
AY450489
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436656 |
Savolainen et al., unpublished |
|
Rhinovirus A51 (RV-A51) |
| RV-A51 |
F01-4081 |
VP4+VP2(p) |
420 |
AF343585 |
Savolainen et al., 2002 |
|
|
VP1 |
888 |
AY355232 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1397
|
AY450490
|
Laine et al., unpub. |
|
Rhinovirus A53 (RV-A53) |
| RV-A53 |
F01-3928 |
CG |
7143 |
DQ473507 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343592 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355234 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1110
|
AY450491
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436681 |
Savolainen et al., unpublished |
|
Rhinovirus A54 (RV-A54) |
| RV-A54 |
F01-3774 |
VP4+VP2(p) |
420 |
AF343612 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355235 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1358
|
AY450492
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436652 |
Savolainen et al., unpublished |
|
| RV-A54 |
SF-4006 |
VP4+VP2(p) |
420 |
AF343613 |
Savolainen et al., 2002 |
previously designated
as A98 |
|
VP1 |
858 |
AY355279 |
Ledford et al.,
unpub. |
| VP3(p)+VP1+2A(p) |
1388
|
AY450524
|
Laine et al., unpub. |
Rhinovirus A55 (RV-A55) |
| RV-A55 |
Wis315E (Wisconsin/64) |
CG |
7036 |
DQ473511 |
Kistler et al., 2007 |
Missing part of 5' UTR |
| VP4+VP2(p) |
420 |
AF343621 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355236 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1351
|
AY450493 |
Laine et al., unpub. |
|
| 3D(p) |
380 |
AY436663 |
Savolainen et al., unpublished |
|
Rhinovirus A56 (RV-A56) |
| RV-A56 |
CH82
[V-151-011-021] |
CG |
7136 |
FJ445140 |
Palmenberg
et al., 2009 |
|
| 5'UTR(p) |
255 |
Z29661 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343610 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355237 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1371
|
AY450494
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436657 |
Savolainen et al., unpublished |
|
| RV-A56 |
unnamed |
CG |
7071 |
EU840727 |
Tapparel et al., 2009 |
|
Rhinovirus A57 (RV-A57) |
| RV-A57 |
CH47 |
VP4+VP2(p) |
420 |
AF343622 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355238 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450495
|
Laine et al., unpub. |
|
Rhinovirus A58 (RV-A58) |
| RV-A58 |
21-CV20 |
VP2(p) |
336 |
Z47570 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AY040236 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355239 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1338
|
AY450496
|
Laine et al., unpub. |
|
Rhinovirus A59 (RV-A59) |
| RV-A59 |
611-CV35 |
CG |
7135 |
DQ473500 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343611 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355240 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1365
|
AY450497
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436664 |
Savolainen et al., unpublished |
|
Rhinovirus A60 (RV-A60) |
| RV-A60 |
2268-CV37 |
VP4+VP2(p) |
420 |
AF343627 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355241 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1425
|
AY450498
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436653 |
Savolainen et al., unpublished |
|
Rhinovirus A61 (RV-A61) |
| RV-A61 |
6669-CV39 |
VP4+VP2(p) |
420 |
AF343601 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355242 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1393
|
AY450499
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436671 |
Savolainen et al., unpublished |
|
Rhinovirus A62 (RV-A62) |
| RV-A62 |
1963M-CV40 |
VP2(p) |
336 |
Z47571 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343618 |
Savolainen et al., 2002 |
|
| VP1 |
846 |
AY273204 |
Vlasak et al.,
2003 |
|
| VP3(p)+VP1+2A(p) |
1361 |
AY458611 |
Laine et al.,
unpublished |
|
|
VP1 |
846 |
AY355243 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436660 |
Savolainen et al., unpublished |
|
Rhinovirus A63 (RV-A63) |
| RV-A63 |
6360-CV 41 |
5'UTR(p) |
259 |
Z29662 |
Mori and Clewley, 1994 |
|
| VP4+VP2(p) |
420 |
AF343636 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355244 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1392
|
AY450500
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436658 |
Savolainen et al., unpublished |
|
Rhinovirus A64 (RV-A64) |
| RV-A64 |
6258-CV44 |
CG |
7129 |
EF173417 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343629 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355245 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450501
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436667 |
Savolainen et al., unpublished |
|
Rhinovirus A65 (RV-A65) |
| RV-A65 |
425-CV47 |
VP2(p) |
336 |
Z47572 |
Horsnell et al.,
1995 |
|
| VP4+VP2(p) |
420 |
AF343586 |
Savolainen et al., 2002 |
|
|
VP1 |
888 |
AY355246 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1341
|
AY450502
|
Laine et al., unpub. |
|
Rhinovirus A66 (RV-A66) |
| RV-A66 |
1983-CV48 |
VP4+VP2(p) |
384 |
AF343640 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355247 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1405
|
AY450503
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436655 |
Savolainen et al., unpublished |
|
Rhinovirus A67 (RV-A67) |
| RV-A67 |
1857-CV51 |
VP4+VP2(p) |
420 |
AF343603 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355248 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1315
|
AY450504
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436672 |
Savolainen et al., unpublished |
|
Rhinovirus A68 (RV-A68) |
| RV-A68 |
F02-2317 Wood |
VP4+VP2(p) |
420 |
AF343591 |
Savolainen et al., 2002 |
|
|
VP1 |
891 |
AY355249 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1363
|
AY450505
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436679 |
Savolainen et al., unpublished |
|
Rhinovirus A71 (RV-A71) |
| RV-A71 |
SF365 |
VP4+VP2(p) |
420 |
AF343587 |
Savolainen et al., 2002 |
|
|
VP1 |
885 |
AY355252 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1381
|
AY450506
|
Laine et al., unpub. |
|
Rhinovirus A73 (RV-A73) |
| RV-A73 |
107E |
CG |
7140 |
DQ473492 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343602 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355254 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1395
|
AY450507
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436668 |
Savolainen et al., unpublished |
|
Rhinovirus A74 (RV-A74) |
| RV-A74 |
328A |
CG |
7120 |
DQ473494 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343631 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355255 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1384
|
AY450508
|
Laine et al., unpub. |
|
Rhinovirus A75 (RV-A75) |
| RV-A75 |
328F |
CG |
7137 |
DQ473510 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343639 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355256 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1397
|
AY450509
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436670 |
Savolainen et al., unpublished |
|
Rhinovirus A76 (RV-A76) |
| RV-A76 |
H00062 |
CG |
7129 |
DQ473502 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343624 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355257 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1372
|
AY450510
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436661 |
Savolainen et al., unpublished |
|
Rhinovirus A77 (RV-A77) |
| RV-A77 |
130-63 |
VP4+VP2(p) |
420 |
AF343608 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355258 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1382
|
AY450511
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436650 |
Savolainen et al., unpublished |
|
Rhinovirus A78 (RV-A78) |
| RV-A78 |
2030-65 |
CG |
7145 |
EF173418 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AY016408 |
Savolainen et al., 2002 |
|
|
VP1 |
861 |
AY355259 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1365
|
AY450512
|
Laine et al., unpub. |
|
| 3D(p) |
468 |
AY436647 |
Savolainen et al., unpublished |
|
Rhinovirus A80 (RV-A80) |
| RV-A80 |
277G |
VP4+VP2(p) |
420 |
AF343593 |
Savolainen et al., 2002 |
|
|
VP1 |
876 |
AY355261 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1408
|
AY450514
|
Laine et al., unpub. |
|
Rhinovirus A81 (RV-A81) |
| RV-A81 |
483F2 |
VP4+VP2(p) |
420 |
AF343606 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355262 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1366
|
AY450515
|
Laine et al., unpub. |
|
Rhinovirus A82 (RV-A82) |
| RV-A82 |
03647 |
VP4+VP2(p) |
420 |
AY040233 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355263 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1382
|
AY450516
|
Laine et al., unpub. |
|
| RV-A82 |
Santa Cruz, CA |
CG |
7129 |
DQ473509 |
Kistler et al., 2007 |
|
Rhinovirus A85 (RV-A85) |
| RV-A85 |
50-525-CV54 |
CG |
7140 |
download |
G. Stanway et al.,
unpub. |
|
| VP4+VP2(p) |
420 |
AF343642 |
Savolainen et al., 2002 |
|
|
VP1 |
858 |
AY355266 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1373
|
AY450517
|
Laine et al., unpub. |
|
Rhinovirus A88 (RV-A88) |
| RV-A88
|
CVD 01-0165-Dambrauskas |
CG |
7143 |
DQ473504 |
Kistler et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343590 |
Savolainen et al., 2002 |
|
|
VP1 |
870 |
AY355269 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1411
|
AY450518
|
Laine et al., unpub. |
|
Rhinovirus A89 (RV-A89) |
| RV-A89 |
41467-Gallo |
CG |
7152 |
M16248 |
Duechler et al.,
1987 |
|
|
VP1 |
876 |
AY355270 |
Ledford et al.,
unpub. |
|
| 3D(p) |
468 |
AY436675 |
Savolainen et al., unpublished |
|
Rhinovirus A90 (RV-A90) |
| RV-A90 |
K2305 |
VP4+VP2(p) |
420 |
AF343620 |
Savolainen et al., 2002 |
|
|
VP1 |
855 |
AY355271 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1360
|
AY450520
|
Laine et al., unpub. |
|
Rhinovirus A94 (RV-A94) |
| RV-A94 |
SF-1803 |
CG |
7132 |
EF173419 |
Tapparel et al., 2007 |
|
| VP4+VP2(p) |
420 |
AF343638 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355275 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1389
|
AY450521
|
Laine et al., unpub. |
|
Rhinovirus A95 (RV-A95): now designated as RV-A8 |
Rhinovirus A96 (RV-A96) |
| RV-A96 |
SF-1426 |
VP4+VP2(p) |
420 |
AF343604 |
Savolainen et al., 2002 |
|
|
VP1 |
867 |
AY355277 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1356
|
AY450523
|
Laine et al., unpub. |
|
Rhinovirus A98 (RV-A98): now designated as RV-A54 |
Rhinovirus A100 (RV-A100) |
| RV-A100 |
K6579 |
VP4+VP2(p) |
420 |
AF343643 |
Savolainen et al., 2002 |
|
|
VP1 |
864 |
AY355281 |
Ledford et al.,
unpub. |
|
| VP3(p)+VP1+2A(p) |
1376
|
AY450463
|
Laine et al., unpub. |
|
| 3D(p) |
434 |
AY436662 |
Savolainen et al., unpublished |
|
Rhinovirus A101 (RV-A101)
|
| RV-A101 |
RV-A101 |
CG |
7130 |
GQ415051 |
Rathe et al., 2010 |
|
| RV-A101 |
RV-A101-v1 |
CG |
7129 |
GQ415052 |
Rathe et al., 2010 |
|
Rhinovirus A102 (RV-A102)
|
| RV-A102 |
AMS323 (Netherlands) |
CG |
7160 |
EF155421 |
de Vries et al., 2008 |
|
Rhinovirus A103 (RV-A103)
|
| RV-A103 |
WA327E/09 |
CG |
7168 |
JF965515 |
Chidlow et al. , unpub. |
|
| RV-A103 |
p1038_s6391_2000 |
CG(p) |
6998 |
JQ747749 |
Liggett et al., unpub. |
|
| RV-A103 |
p1102_sR884_2008 |
CG(p) |
6837 |
JQ994499 |
Liggett et al., unpub. |
|
Rhinovirus A104 (RV-A104)
|
| RV-A104 |
p1025_sR2625_2009 |
CG(p) |
6843 |
JN562727 |
Liggett et al., unpub. |
previously designated as A24 |
| RV-A104 |
p1131_sR2052_2009 |
CG(p) |
6878 |
JX074047 |
Liggett et al., unpub. |
previously designated as A24 |
| RV-A104 |
p1131_sR2053_2009 |
CG(p) |
6892 |
JX193797 |
Liggett et al., unpub. |
previously designated as A24 |
Rhinovirus A105 (RV-A105)
|
| RV-A105 |
p1064_sR985_2009 |
CG(p) |
6709 |
JN614995 |
Liggett et al., unpub. |
previously designated as A57 |
| RV-A105 |
p1105_sR2804_2008 |
CG(p) |
6512 |
JN990699 |
Liggett et al., unpub. |
previously designated as A57 |
Rhinovirus A106 (RV-A106)
|
| RV-A106 |
p1044_sR114_2008 |
CG(p) |
7127 |
JQ245971 |
Liggett et al., unpub. |
previously designated as A71 |
| RV-A106 |
p1047_sR141_2008 |
CG(p) |
6728 |
JX025555 |
Liggett et al., unpub. |
previously designated as A71 |
Rhinovirus A107 (RV-A107)
|
| RV-A107 |
SO7259 |
VP1 |
991 |
KC859319 |
Cuevas et al., unpub. |
|
Rhinovirus A108 (RV-A108)
|
| RV-A108 |
SO7696 |
VP1 |
1010 |
KC859318 |
Cuevas et al., unpub. |
|
Rhinovirus A109 (RV-A109)
|
| RV-A109 |
F0062-V1 |
VP4+VP2(p) |
437 |
n/a |
Zlateva et al., unpub. |
|
| VP3(p)+VP1+2A(p) |
1356 |
n/a |
Zlateva et al., unpub. |
|
| |
|
|
|
|
|
|
Untyped isolates
|
| RV-A sp. |
OK88-8162 |
VP1(p) |
301 |
AF152281 |
Oberste et al.,
2000 |
Note: 89.4% match with
RV-31 |
| RV-A sp. |
NY-026 (1029) |
VP4 |
201 |
DQ875920 |
Lamson et al., 2006 |
|
| RV-A sp. |
NY-039 (1042) |
VP4 |
201 |
DQ875923 |
Lamson et al., 2006 |
|
| |
|
|
|
|
|
|
|
|
|
CG = complete genome
(p) = partial gene
sequence |
References
|
|
