| |
Genus:
Sapelovirus
Species:
Simian sapelovirus (proposed new species name "Sapelovirus B")
| Type: simian sapelovirus 1
(SSV-1) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Type: simian sapelovirus
2 (SSV-2) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Type: simian sapelovirus
3 (SSV-3) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3'
UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region
|
Length
|
Accession No.
|
Reference |
Comments |
Simian sapelovirus 1 (SSV-1)
|
| SSV-1 |
SV2-2383 |
VP1 |
852 |
AF326755 |
Oberste et al., 2002 |
|
|
CG(p) |
8126 |
AY064708 |
Oberste et al., 2003 |
5' end of genome missing |
| |
|
|
|
|
|
|
Simian sapelovirus 2 (SSV-2)
|
| SSV-2 |
SV49-2600 |
CG(p) |
8108 |
awaited |
Knowles et al., unpub. |
5' end of genome missing |
|
5'UTR(p)+L+VP4(p) |
884 |
AY064720 |
Oberste et al., 2003 |
|
| VP1 |
876 |
AF326765 |
Oberste et al., 2002 |
|
|
3D(p) |
599 |
AY064714 |
Oberste et al., 2003 |
|
| SSV-2 |
VRDL1 |
CG(p) |
7971 |
EU789367 |
Victoria et al., 2008 |
5' end of genome missing |
| |
|
|
|
|
|
|
Simian sapelovirus 3 (SSV-3)
|
| SSV-3 |
SV16-2450-SD |
5'UTR(p)+L+VP4(p) |
1059 |
AY064715 |
Oberste et al., 2003 |
|
| VP1 |
879 |
AF326752 |
Oberste et al., 2002 |
|
|
3D(p) |
599 |
AY064709 |
Oberste et al., 2003 |
|
| SSV-3 |
SV18-2481-B2 |
5'UTR(p)+L+VP4(p) |
1060 |
AY064716 |
Oberste et al., 2003 |
|
| VP1 |
873 |
AF326753 |
Oberste et al, 2002 |
|
|
3D(p) |
599 |
AY064710 |
Oberste et al., 2003 |
|
| 3D(p) |
492 |
n/a |
Pöyry et al., 1999 |
sequence is identical to
AY064710 |
| SSV-3 |
SV42-M9 |
5'UTR(p)+L+VP4(p) |
1059 |
AY064717 |
Oberste et al., 2003 |
|
| VP1 |
888 |
AF326760 |
Oberste et al, 2002 |
|
|
3D(p) |
599 |
AY064711 |
Oberste et al., 2003 |
|
| SSV-3 |
SV44-OM114s |
5'UTR(p)+L+VP4(p) |
1026 |
AY064718 |
Oberste et al., 2003 |
|
| VP1 |
885 |
AF326762 |
Oberste et al, 2002 |
|
|
3D(p) |
599 |
AY064712 |
Oberste et al., 2003 |
|
| SSV-3 |
SV45-M19h |
5'UTR(p)+L+VP4(p) |
1053 |
AY064719 |
Oberste et al., 2003 |
|
| VP1 |
879 |
AF326763 |
Oberste et al, 2002 |
|
|
3D(p) |
599 |
AY064713 |
Oberste et al., 2003 |
|
| SSV-3 |
RhMk/WUHARV-1 |
CG(p) |
8059 |
JX627573 |
Handley et al., ,2012 |
USA: 10-Jan-2010 |
| SSV-3 |
RhMk/WUHARV-2 |
CG(p) |
8025 |
JX627574 |
Handley et al., ,2012 |
USA: 10-Jan-2010 |
| SSV-3 |
Cam13/Cambodia/2015 |
CG(p) |
8195 |
LC503602 |
Zhang et al., 2019 |
Macaca fascicularis |
| |
|
|
|
|
|
|
Simian sapelovirus untyped
|
| SSV-4 |
md/NGR_2017_NHP_SV |
CG(p) |
8207 |
MN784122 |
George et al., unpub. |
Mandrillus leucophaeus |
| SSV-? |
Rh/Cg10192/USA/2014 |
VP4+VP2 |
1537 |
KT984501 |
Kapusinszky et al., unpub. |
Macaca mulatta |
| SSV-? |
Rh/Cg1921/USA/2014 |
? |
1025 |
KT984502 |
Kapusinszky et al., unpub. |
Macaca mulatta |
| SSV-? |
Rh/Cg7136/USA/2014 |
? |
1644 |
KT984503 |
Kapusinszky
et al., unpub. |
Macaca
mulatta |
| |
|
|
|
|
|
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
References
Handley, S.A., Thackray, L.B., Zhao, G., Presti,
R., Miller, A.D., Droit, L., Abbink, P., Maxfield, L.F., Kambal, A.,
Duan, E., Stanley, K., Kramer, J., Macri, S.C., Permar, S.R.,
Schmitz, J.E., Mansfield, K., Brenchley, J.M., Veazey, R.S.,
Stappenbeck, T.S., Wang, D., Barouch, D.H. and Virgin, H.W. (2012).
Pathogenic simian immunodeficiency virus infection is associated
with expansion of the enteric virome. Cell 151: 253-266.
Oberste, M.S., Maher, K. and Pallansch, M.A. (2002). Molecular phylogeny and
proposed classification of the simian picornaviruses. J. Virol. 76: 1244-1251.
Oberste, M.S., Maher, K. and Pallansch, M.A. (2003). Genomic evidence
that simian virus 2 and six other simian picornaviruses represent a new genus in
Picornaviridae. Virology 314: 283-293.
Pöyry, T., Kinnunen, L., Hovi, T. and Hyypiä, T. (1999). Relationships between simian
and human enteroviruses. Journal of General Virology 80: 635-638.
Victoria, J.G., Kapoor, A., Dupuis, K., Schnurr,
D.P. and Delwart, E.L. (2008). Rapid Identification of Known and New
RNA Viruses from Animal Tissues. PLoS Pathog 4(9): e1000163.
doi:10.1371/journal.ppat.1000163.
Zhang W, Kataoka M, Doan HY, Ami Y, Suzaki Y,
Takeda N, Muramatsu M, Li TC. Characterization of a Novel Simian
Sapelovirus Isolated from a Cynomolgus Monkey using PLC/PRF/5 Cells.
Sci Rep. 2019 Dec 27;9(1):20221. doi: 10.1038/s41598-019-56725-z.
PubMed PMID: 31882888; PubMed Central PMCID: PMC6934677.
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