| |
Genus: Hepatovirus
Species: Hepatovirus F
| type: hepatovirus F1 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| type: hepatovirus F2 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| type: hepatovirus F3 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length |
Accession No.
|
Reference |
Comments |
Hepatovirus F1 (HepV-F1)
|
| HepV-F1 |
rat/KEF121Sigmas2012 (Mexico) |
CG |
7563 |
KT452685 |
Drexler et al., 2015 |
Sigmodon
mascotensis |
| |
|
|
|
|
|
|
Hepatovirus F2 (HepV-F2)
aka Marmota himalayana hepatovirus
(MHHV)
|
| HepV-F2 |
woodchuck/2ID/China/2013 |
CG |
7569 |
KT229611 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/3ID/China/2013 |
CG |
7569 |
KT229612 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
mouse/YS/China/2019 |
CG(p) |
7575 |
MW391925 |
W. Zhu, unpub. |
Apodemus peninsulae |
| HepV-F2 |
woodchuck/1B/China/2013 |
VP1 |
918 |
KT229577 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/1H/China/2013 |
VP1 |
918 |
KT229578 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/1F/China/2013 |
VP1 |
918 |
KT229579 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/2B/China/2013 |
VP1 |
918 |
KT229580 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/2H/China/2013 |
VP1 |
918 |
KT229581 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/2F/China/2013 |
VP1 |
918 |
KT229582 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/3B/China/2013 |
VP1 |
918 |
KT229583 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/3H/China/2013 |
VP1 |
918 |
KT229584 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/3F/China/2013 |
VP1 |
918 |
KT229585 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/4B/China/2013 |
VP1 |
918 |
KT229586 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/4H/China/2013 |
VP1 |
918 |
KT229587 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/4F/China/2013 |
VP1 |
918 |
KT229588 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/5B/China/2013 |
VP1 |
918 |
KT229589 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/5H/China/2013 |
VP1 |
918 |
KT229590 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/5F/China/2013 |
VP1 |
918 |
KT229591 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/6B/China/2013 |
VP1 |
918 |
KT229592 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/6H/China/2013 |
VP1 |
918 |
KT229593 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/6F/China/2013 |
VP1 |
918 |
KT229594 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/7B/China/2013 |
VP1 |
918 |
KT229595 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/7H/China/2013 |
VP1 |
918 |
KT229596 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/7F/China/2013 |
VP1 |
918 |
KT229597 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/17B/China/2013 |
VP1 |
918 |
KT229598 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/17H/China/2013 |
VP1 |
918 |
KT229599 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/18H/China/2013 |
VP1 |
918 |
KT229600 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/18B/China/2013 |
VP1 |
918 |
KT229601 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/8F/China/2013 |
VP1 |
918 |
KT229602 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/9F/China/2013 |
VP1 |
918 |
KT229603 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/10F/China/2013 |
VP1 |
918 |
KT229604 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/11F/China/2013 |
VP1 |
918 |
KT229605 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/12F/China/2013 |
VP1 |
918 |
KT229606 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/13F/China/2013 |
VP1 |
918 |
KT229607 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/14F/China/2013 |
VP1 |
918 |
KT229608 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/15F/China/2013 |
VP1 |
918 |
KT229609 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
woodchuck/16F/China/2013 |
VP1 |
918 |
KT229610 |
Yu et al., 2016 |
Marmota himalayana |
| HepV-F2 |
marmot/XJ/CHN/2016 |
P1 |
1613 |
MW173393 |
Sun & He, unpub. |
|
| |
|
|
|
|
|
|
Hepatovirus F3 (HepV-F3) (aka Didelphis aurita hepatitis A virus )
|
| DaHV |
opossum/Brazil/2015 |
CG(p) |
7436 |
MG181943 |
de Oliveira Carneiro et al., 2018 |
|
| |
|
|
|
|
|
|
| CG = complete genome; (p) = partial gene sequence |
References
de Oliveira Carneiro I, Sander AL, Silva N,
Moreira-Soto A, Normann A, Flehmig B, Lukashev AN, Dotzauer A, Wieseke N, Franke
CR, Drexler JF. A novel marsupial hepatitis A virus corroborates complex
evolutionary patterns shaping the genus Hepatovirus. J Virol. 2018 Apr
25. pii: JVI.00082-18. doi: 10.1128/JVI.00082-18. [Epub ahead of print] PubMed
PMID: 29695421.
Drexler, J.F., Corman, V.M., Lukashev, A.N.,
van den Brand, J.M.A., Gmyl, A.P., Brünink, S., Rasche, A., Seggewiβ, N., Feng,
H., Leijten, L.M., Vallo, P., Kuiken, T., Dotzauer, A., Ulrich, R.G., Lemon,
S.M., Drosten, C. and the Hepatovirus Ecology Consortium. (2015). Evolutionary
origins of hepatitis A virus in small mammals. Proc. Natl. Acad. Sci. USA 2015;
published ahead of print November 2, 2015, doi:10.1073/pnas.1516992112
Yu, J.M., Li, L.L., Zhang, C.Y., Lu, S., Ao, Y.Y., Gao, H.C., Xie,
Z.P., Xie, G.C., Sun, X.M., Pang, L.L., Xu, J.G., Lipkin, W.I. and
Duan, Z.J. (2016). A novel hepatovirus identified in wild woodchuck
Marmota himalayana. Sci. Rep. 6: 22361.
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