| |
Genus: Hepatovirus
Species: Hepatovirus H
| Type: hepatovirus H1 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Type: hepatovirus H2 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Type: hepatovirus H3 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Type: hepatovirus H4 |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
pX |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length |
Accession No.
|
Reference |
Comments |
Hepatovirus H1 (HepV-H1)
|
| Hedgehog HV |
Igel8Erieur2014
(Germany) |
CG(p) |
6929 |
KT452691 |
Drexler et al., 2015 |
Erinaceus
europaeus |
| Hedgehog HV |
Igel75Erieur2014 |
CG |
7416 |
KT452695 |
Drexler et al., 2015 |
Erinaceus
europaeus |
| Hedgehog HV |
Igel68Erieur2014 |
CG |
7434 |
KT452698 |
Drexler et al., 2015 |
Erinaceus
europaeus |
| |
|
|
|
|
|
|
Hepatovirus H2 (HepV-H2)
|
| Bat HV |
M32Eidhel2010
(Ghana) |
CG(p) |
7333 |
KT452714 |
Drexler et al., 2015 |
Eidolon helvum |
| |
|
|
|
|
|
|
Hepatovirus H3 (HepV-H3)
|
| Tupaia HV |
TN1/CHA/2012 |
CG(p) |
7417 |
KT877158 |
Ng et al., unpub. |
Tupaia belangeri chinensis
(Tree shrew) |
| |
|
|
|
|
|
|
Hepatovirus H4 (HepV-H4)
|
| Bat HV |
bat3206/Hipposideros_armiger/2011 |
CG(p) |
7184 |
MG559674 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat7000/Hipposideros_armiger/2014 |
3D(p) |
240 |
MG559666 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat7036/Hipposideros_armiger/2014 |
3D(p) |
240 |
MG559667 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat2555/Hipposideros_armiger/2011 |
3D(p) |
210 |
MG559668 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat2558/Hipposideros_armiger/2011 |
3D(p) |
210 |
MG559669 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat3625/Hipposideros_armiger/2012 |
3D(p) |
240 |
MG559670 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat2494/Hipposideros_armiger/2011 |
3D(p) |
216 |
MG559671 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat2513/Hipposideros_armiger/2011 |
3D(p) |
552 |
MG559672 |
Li et al., 2018 |
Hipposideros armiger |
| Bat HV |
bat3206/Hipposideros_armiger/2011 |
3D(p) |
546 |
MG559673 |
Li et al., 2018 |
Hipposideros armiger |
| |
|
|
|
|
|
|
possible unassigned hepatovirus H
|
| HepV-H |
bat/KSA215/Saudi Arabia/2012 |
CG |
7473 |
KX420952 |
Mishra et al., 2019 |
Rhinopoma hardwickii |
| |
|
|
|
|
|
|
| CG = complete genome; (p) = partial gene sequence |
References
Drexler, J.F., Corman, V.M., Lukashev, A.N.,
van den Brand, J.M.A., Gmyl, A.P., Brünink, S., Rasche, A., Seggewiβ, N., Feng,
H., Leijten, L.M., Vallo, P., Kuiken, T., Dotzauer, A., Ulrich, R.G., Lemon,
S.M., Drosten, C. and the Hepatovirus Ecology Consortium. (2015). Evolutionary
origins of hepatitis A virus in small mammals. Proc. Natl. Acad. Sci. USA 2015;
published ahead of print November 2, 2015, doi:10.1073/pnas.1516992112.
Li W, Wang B, Li B, Zhang W, Zhu Y, Shi ZL, Yang XL. Genomic Characterization of
a Novel Hepatovirus from Great Roundleaf Bats in China. Virol Sin. 2018
Feb;33(1):108-110. doi: 10.1007/s12250-018-0013-6. Epub 2018 Feb 19. PubMed
PMID: 29460117; PubMed Central PMCID: PMC6178082.
Mishra N, Fagbo SF, Alagaili AN, Nitido A, Williams SH, Ng J, Lee B,
Durosinlorun A, Garcia JA, Jain K, Kapoor V, Epstein JH, Briese T, Memish ZA,
Olival KJ, Lipkin WI. A viral metagenomic survey identifies known and novel
mammalian viruses in bats from Saudi Arabia. PLoS One. 2019 Apr
10;14(4):e0214227. doi: 10.1371/journal.pone.0214227. eCollection 2019. PubMed
PMID: 30969980.
|
