Avisivirus C seqs

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Genera

Genus: Avisivirus

Species: Avisivirus C

Type: avisivirus C1 (Asv-C1)

5' UTR VP0 VP3 VP1 2A1 2A3 2A4 2B 2C 3A 3B 3C 3D 3' UTR

(White areas indicate genes which haven't yet been sequenced completely; grey areas are where only partial sequences exist)

Virus	Strain	Region	Length	Accession no.	Reference	Comments
Avisivirus C1 (AsV-C1) (chicken picornavirus 3)
AsV-C1	ch/45C/Hong Kong	CG(p)	7310	KF979334	Lau et al., 2014	Gallus gallus
AsV-C1	ch/Pf-CHK1/HUN/2013	CG(p)	7270	KT880669	Boros et al., 2016	Gallus gallus
AsV-C1	ch/AVE052/BRA/2009	CG(p)	7342	MG708279	Castro et al., 2018	Gallus gallus
AsV-C1	ch/NLD/2019/V_M_036_picorna_3	CG(p)	7024	MW684799	de Rooij et al., unpub.	Gallus gallus domesticus

CG = complete genome (p) = partial gene sequence

References

Boros, A., Pankovics, P., Adonyi, A., Fenyvesi, H., Day, J.M., Phan, T.G., Delwart, E. and Reuter, G. (2016). A diarrheic chicken simultaneously co-infected with multiple picornaviruses: Complete genome analysis of avian picornaviruses representing up to six genera. Virology 489: 63-74. Epub 2015 Dec 18.

Castro, C.M.O., Chagas, E.H.N., Bezerra, D.A.M., Ribeiro, A.F., da Silva, S.P., Cruz, A.C.R., Júnior, E.C.S., Silva, R.R. and Mascarenhas, J.D.A.P. (2018). A proposed new strain of avian picornavirus in broiler chicken from Brazil. Genome Announc. 6: e00012-18.

Lau, S.K., Woo, P.C., Yip, C.C., Li, K.S., Fan, R.Y., Bai, R., Huang, Y., Chan, K.H. and Yuen, K.Y. (2014). Chickens host diverse picornaviruses originated from potential interspecies transmission with recombination. J. Gen. Virol. 95: 1929-1944.

Avisivirus C1 (AsV-C1) (chicken picornavirus 3)