| |
Genus: Aphthovirus
Species: Aphthovirus reedi
|
Type: bovine rhinitis B virus 1 (BRBV-1) (formerly bovine rhinovirus 2) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Type: bovine rhinitis B virus 2 (BRBV-2) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Type: bovine rhinitis B virus 3 (BRBV-3) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Type: bovine rhinitis B virus 4 (BRBV-4) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Type: bovine rhinitis B virus 5 (BRBV-5) |
|
| 5' UTR |
L |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
| Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
Bovine rhinitis B virus 1 (BRBV-1)
(formerly bovine
rhinovirus 2)
|
| BRBV-1 |
bov/EC 11/UK/c.1964 |
CG(p) |
7556 |
EU236594 |
Hollister et al., 2008 |
5' end missing |
| BRBV-1 |
bov/BSRI1/USA/2013 |
CG(p) |
7359 |
KP264980 |
Ng et al., 2015 |
5' end missing |
| BRBV-1 |
bov/140032-2/USA/2013 |
CG(p) |
7499 |
KP236130 |
Hause et al., 2015 |
5' end missing |
| BRBV-1 |
bov/TCH8/USA/2013 |
CG(p) |
7484 |
KU168862 |
Tokarz & Lipkin, unpub. |
5' end missing |
| BRBV-1 |
bov/MexB48 |
CG(p) |
7414 |
KU159361 |
Mitra et al., 2016 |
5' end missing |
| BRBV-1 |
bov/Canada/2017-2018 |
pp-coding |
6585 |
MT700546 |
Zhang, unpub. |
reading frame problems |
| BRBV-1 |
bov/Canada/2017-2018 |
pp-coding |
6585 |
MT700547 |
Zhang, unpub. |
reading frame problems |
| |
|
|
|
|
|
|
Bovine rhinitis B virus 2 (BRBV-2)
|
| BRBV-2 |
bov/BSRI2/USA/2013 |
L-VP3 |
1803 |
KP264976 |
Ng et al., 2015 |
|
|
VP1(p)+2A+2B(p) |
816 |
KP264977 |
Ng et al., 2015 |
|
|
2C(p)-3C(p) |
1182 |
KP264978 |
Ng et al., 2015 |
|
|
3C(p)-3D |
1527 |
KP264979 |
Ng et al., 2015 |
|
| BRBV-2 |
bov/MexB10/Mexico/2015 |
CG(p) |
7271 |
KU159357 |
Mitra et al., 2016 |
5' & 3' ends missing |
| BRBV-2 |
bov/SWE1/2014 |
CG(p) |
7476 |
KY432299 |
Blomstrom et al., unpub. |
5' end missing |
| BRBV-2 |
bov/CHN1/China/2014 |
CG(p) |
7465 |
MT160419 |
Yi-Lun & Shao-Lun, unpub. |
5' & 3' ends missing |
| BRBV-2 |
bov/6900/USA/2020 |
CG(p) |
7466 |
MZ574106 |
Hause and Bhattarai, unpub. |
|
| BRBV-2 |
bov/B10/Montana/USA/2020 |
CG(p) |
7410 |
OL410606 |
Bhattarai et al., unpub. |
5' end missing |
| BRBV-2 |
bov/SC1_LZ05/China/2020 |
CG(p) |
7423 |
MZ052128 |
Zhou,
unpub. |
5' end missing |
| BRBV-2 |
bov/NSWL12.1/AUS/2019 |
CG(p) |
7180 |
OP020158 |
Brito et al., unpub. |
5' end missing |
| BRBV-2 |
bov/NSWL13/AUS/2019 |
CG(p) |
7495 |
OP020159 |
Brito et al., unpub. |
5' end missing |
| BRBV-2 |
bov/NSWL15.1/AUS/2019 |
CG(p) |
7505 |
OP020160 |
Brito et al., unpub. |
5' end missing |
| BRBV-2 |
bov/NSWL5/AUS/2019 |
CG(p) |
7493 |
OP020161 |
Brito et al., unpub. |
5' end missing |
| |
|
|
|
|
|
|
Bovine rhinitis B virus 3 (BRBV-3)
|
| BRBV-3 |
bov/BSRI3/USA/2013 |
CG(p) |
6995 |
KP264975 |
Ng et al., 2015 |
5' end missing |
| |
|
|
|
|
|
|
Bovine rhinitis B virus 4 (BRBV-4)
|
| BRBV-4 |
bov/TCH5/USA/2013 |
CG(p) |
7474 |
KU168861 |
Tokarz & Lipkin, unpub. |
5' end missing |
| BRAV-4 |
bov/MexB29/Mexico/2015 |
CG(p) |
7189 |
KU159358 |
Mitra et al., 2016 |
5' end missing |
| BRAV-4 |
bov/USII/19/USA/2015 |
5'UTR(p)+PP(p) |
4897 |
KU159359 |
Mitra et al., 2016 |
5' end missing |
| |
|
|
|
|
|
|
Bovine rhinitis B virus 5 (BRBV-5)
|
| BRBV-5 |
bov/MexB09/Mexico/2015 |
CG(p) |
7494 |
KU159360 |
Mitra et al., 2016 |
5' end missing |
| BRBV-5 |
bov/D2/Montana/USA/2020 |
CG(p) |
7357 |
OL410605 |
Bhattarai et al., unpub. |
5' end missing |
| BRBV-5 |
bov/NSWL6/AUS/2019 |
CG(p) |
7533 |
OP020154 |
Brito et al., unpub. |
5' end missing |
| BRBV-5 |
bov/NSWL7/AUS/2019 |
CG(p) |
7537 |
OP020155 |
Brito et al., unpub. |
5' end missing |
| BRBV-5 |
bov/NSWL15/AUS/2019 |
CG(p) |
7506 |
OP020156 |
Brito et al., unpub. |
5' end missing |
| BRBV-5 |
bov/NSWL12/AUS/2019 |
CG(p) |
7537 |
OP020157 |
Brito et al., unpub. |
5' end missing |
| |
|
|
|
|
|
|
Bovine rhinitis B virus ? (BRBV-?)
|
| BRBV-? |
bov/SC1_LZ02/China/2020 |
CG(p) |
7472 |
MZ052127 |
Zhou, unpub. |
5' end missing |
| BRBV-? |
sheep/RBV-JN022/China/2022 |
CG(p) |
7578 |
OQ547742 |
Li, unpub. |
5' end missing |
| |
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence
n/a = not available |
Hause, B.M., Collin, E.A., Anderson, J., Hesse, R.A.
and Anderson, G. (2015). Bovine rhinitis viruses are common in U.S.
cattle with bovine respiratory disease. PLoS One 10(3):e0121998.
Hollister, J.R., Vagnozzi, A., Knowles, N.J. and
Rieder, E. (2008). Molecular and phylogenetic analyses of bovine
rhinovirus type 2 shows it is closely related to foot-and-mouth disease
virus. Virology, In press. Jan 15 [Epub ahead of print]
doi:10.1016/j.virol.2007.12.019.
Knowles, N.J. (2005). Molecular identification of all
three bovine rhinovirus serotypes as members of the genus Aphthovirus.
EUROPIC 2005: XIIIth Meeting of the European Study Group on the
Molecular Biology of Picornaviruses, Lunteren, The Netherlands, 23-29th
May 2005. Abstract A18.
Mitra, N., Cernicchiaro, N., Torres, S., Li, F. and
Hause, B.M. (2016). Metagenomic characterization of the virome
associated with bovine respiratory disease in feedlot cattle identified
novel viruses and suggests an etiologic role for influenza D virus. J.
Gen. Virol. 2016 May 5. doi: 10.1099/jgv.0.000492. [Epub ahead of print]
Ng, T.F., Kondov, N.O., Deng, X., Van Eenennaam, A.,
Neibergs, H.L. and Delwart, E. (2015). A metagenomics and case-control
study to identify viruses associated with bovine respiratory disease. J.
Virol. 89: 5340-5349.
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