| |
Genus: Enterovirus
Species: Enterovirus E
| Serotype: enterovirus E1 (EV-E1) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: enterovirus E2 (EV-E2) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: enterovirus E3 (EV-E3) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: enterovirus E4 (EV-E4) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
|
Serotype: enterovirus E5* (EV-E5) |
|
| 5' UTR |
VP4 |
VP2 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
*, candidate type
References
| Virus |
Strain |
Host |
Region |
Length
|
Accession No. |
Reference |
Comments |
Enterovirus E1 (EV-E1)
|
| EV-E1 |
VG(5)27* (Northern Ireland/57) |
Bos
taurus |
CG |
7414 |
D00214 |
Earle et al., 1988 |
|
| EV-E1 |
Vir 404/03 (Germany) |
Bos
taurus |
CG |
7416 |
DQ092771 |
Zell et al.,
2006 |
|
| EV-E1 |
LC-R4
(USA); ATCC VR-248 |
Bos taurus |
CG |
7414 |
DQ092769 |
Zell
et al., 2006 |
|
| EV-E1 |
BEV-1 (Washington/57) |
Bos taurus |
5'NCR(p) |
385 |
AJ250671 |
Lin et al., 2000 |
|
|
CG(p) |
7379 |
n/a |
Knowles
et al.,
unpub. |
|
| EV-E1 |
D 8/01
(Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3419 |
DQ092782 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1759 |
DQ092783 |
Zell et al.,
2006 |
|
| EV-E1 |
E 6-82
(Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3423 |
DQ092776 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1607 |
DQ092777 |
Zell et al.,
2006 |
|
| EV-E1 |
VD
2860/1-99 |
Bos taurus |
5'UTR+P1+2A(p) |
3421 |
DQ092774 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1595 |
DQ092775 |
Zell et al.,
2006 |
|
| EV-E1 |
D
58/96-V2130 (Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3412 |
DQ092772 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1691 |
DQ092773 |
Zell et al.,
2006 |
|
| EV-E1 |
BDEV/USA |
Tursiops truncatus
(bottlenose
dolphin) |
VP4(p) to 2A(p) |
2613 |
EU886967 |
Nollens et al., 2009 |
|
| EV-E1 |
M63 (Worcestershire,
England, 1960) |
Bos
taurus |
CG(p) |
7379 |
n/a |
Knowles et al., unpub. |
|
| EV-E1? |
82Sh2R (India,
1982) |
Ovis
aries |
5'NCR(p) |
393 |
AJ250674 |
Lin et al.,
unpub. |
|
| EV-E1 |
82Sh5R (India, 1982) |
Ovis
aries |
CG(p) |
7383 |
n/a |
Knowles et al., unpub. |
|
| EV-E1 |
BAN/2008/709010 |
Macaca mulatta
(Rhesus
macaque) |
VP1(p) |
252 |
JX538126 |
Oberste et al., 2013 |
|
| EV-E1 |
bo/US/PA12-24791/2012 |
bovine |
CG |
7411 |
KC667561 |
Koster and Killian, unpub. |
|
| EV-E1 |
bo/PD2017
(Italy/2017) |
Bos taurus |
CG(p) |
7319 |
MG571548 |
Zaccaria et al., unpub. |
|
| EV-E1 |
THAI/B1029/2016 |
cattle |
P1+2A(p) |
2773 |
MH894628 |
Income et al., 2018 |
|
| EV-E1 |
THAI/B1139/2016 |
cattle |
P1+2A(p) |
2775 |
MH894629 |
Income et al., 2018 |
|
| EV-E1 |
THAI/B1079/2016 |
cattle |
P1+2A(p) |
2785 |
MH894632 |
Income et al., 2018 |
|
| EV-E1 |
THAI/B1121/2016 |
cattle |
P1+2A(p) |
2761 |
MH894633 |
Income et al., 2018 |
|
| EV-E1 |
B1-TR2016 |
cattle |
VP3(p)+VP1(p) |
884 |
MG702506 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
114-TR2016
|
cattle |
VP3(p)+VP1(p) |
884 |
MG702507 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
BOZ-TR2016
|
cattle |
VP3(p)+VP1(p) |
884 |
MG702508 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
M2-TR2016
|
cattle |
VP3(p)+VP1(p) |
884 |
MG702509 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
M1-TR2016
|
cattle |
VP3(p)+VP1(p) |
884 |
MG702510 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
B6-TR2016
|
cattle |
VP3(p)+VP1(p) |
884 |
MG702511 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
K2-TR2016 |
cattle |
VP3(p)+VP1(p) |
884 |
MG702512 |
Coskun & Alkan, unpub. |
|
| EV-E1 |
V251/GER/2019 |
Bos taurus |
CG |
7387 |
MT019688 |
B. Hoffmann, unpub. |
|
| |
|
|
|
|
|
|
|
Enterovirus E2 (EV-E2)
|
| EV-E2 |
BEV-165* (M4) (Washington/57) |
Bos
taurus |
CG |
7407 |
N/A |
McIlhatton et al., 1993 |
|
| EV-E2 |
PS 42; ATCC VR-758 |
Bos
taurus |
CG |
7412 |
DQ092792 |
Zell et al.,
2006 |
|
| EV-E2 |
PS 83; ATCC VR-757 |
Bos
taurus |
CG |
7413 |
DQ092793 |
Zell et al.,
2006 |
|
| EV-E2 |
SD 1182
II (Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3414 |
DQ092784 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1520 |
DQ092785 |
Zell et al.,
2006 |
|
| EV-E2 |
D
14/1/96 (Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3414 |
DQ092780 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1881 |
DQ092781 |
Zell et al.,
2006 |
|
| EV-E2 |
56/59/1
(Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3418 |
DQ092778 |
Zell et al.,
2006 |
|
| 3C(p)+3D |
1559 |
DQ092779 |
Zell et al.,
2006 |
|
| EV-E2 |
K2577 (Australia) |
Bos
taurus |
CG |
7405 |
AF123432 |
McCarthy et al., 1999 |
|
| EV-E2 |
SL305 (Australia) |
Bos
taurus |
CG |
7410 |
AF123433 |
McCarthy et al., 1999 |
|
| EV-E2 |
D 3/98
(Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3404 |
DQ092790 |
Zell et al.,
2006 |
|
| 3D |
1457 |
DQ092791 |
Zell et al.,
2006 |
|
| EV-E2 |
M134a (Great
Britain) |
Bos
taurus |
CG(p) |
6557 |
n/a |
Knowles et al., unpub. |
|
| EV-E2 |
M153 (Hertfordshire,
England, 1961) |
Bos
taurus |
CG |
7411 |
n/a |
Knowles et al., unpub. |
|
| EV-E2 |
T10 (Devon, England,
1960) |
Bos
taurus |
CG(p) |
7376 |
n/a |
Knowles et al., unpub. |
|
| EV-E2 |
M6 (Gloucestershire,
England, 1960) |
Bos
taurus |
CG(p) |
7379 |
n/a |
Knowles et al., unpub. |
|
| EV-E2 |
HLJ-3531/2013 |
Bos
taurus |
VP1 |
840 |
KJ956699 |
Zhang et al., 2014 |
|
| EV-E2 |
IS1/Bos
taurus/JPN/1990 |
Bos
taurus |
CG |
7413 |
LC150009 |
Tsuchiaka et al., 2017 |
|
| EV-E2 |
BJ101/China/2015 |
Bos
taurus |
CG |
7409 |
MG650158 |
Zhang et al., unpub. |
|
| EV-E2 |
EV/NGR/2017
(Nigeria) |
environmental |
CG(p) |
7368 |
MH719217 |
Faleye et al., unpub. |
|
| EV-E2 |
NGR/2018/Nigeria |
waste water |
CG(p) |
7344 |
MT542698 |
Faleye et al., unpub. |
|
| EV-E2 |
THAI/B2005/2016 |
cattle |
P1+2A(p) |
2790 |
MH894630 |
Income et al., 2018 |
|
| EV-E2 |
THAI/B2008/2016 |
cattle |
P1+2A(p) |
2779 |
MH894631 |
Income et al., 2018 |
|
| EV-E2 |
K38-TR2016 |
cattle |
VP3(p)+VP1(p) |
884 |
MG702503 |
Coskun & Alkan, unpub. |
|
| EV-E2 |
GX1901/China/2019 |
Bos
taurus |
CG |
7408 |
MN607030 |
Wu et al., unpub. |
|
| EV-E2 |
GX1902/China/2019 |
Bos
taurus |
CG |
7405 |
MN607031 |
Wu et al., unpub. |
|
| EV-E2 |
UFSM-SV89/91/Brazil |
cattle |
CG(p) |
7459 |
OL660538 |
Da Silva et al., unpub. |
|
| |
|
|
|
|
|
|
|
Enterovirus E3 (EV-E3)
|
| EV-E3 |
D
14/3/96* (Germany) |
Bos taurus |
5'UTR+P1+2A(p) |
3416 |
DQ092786 |
Zell et al.,
2006 |
|
| 3C(p)+3D+3'UTR |
1892 |
DQ092787 |
Zell et al.,
2006 |
|
| EV-E3 |
HY12/China/2012 |
Bos taurus |
CG |
7416 |
KF748290 |
Zhu et al., 2014 |
|
| EV-E3 |
5741-TR2016 |
cattle |
VP3(p)+VP1(p) |
884 |
MG702504 |
Coskun & Alkan, unpub. |
|
| EV-E3 |
3065-TR2016 |
cattle |
VP3(p)+VP1(p) |
884 |
MG702505 |
Coskun & Alkan, unpub. |
|
| |
|
|
|
|
|
|
|
Enterovirus E4 (EV-E4)
|
| EV-E4 |
PAK-NIH-21E5*
(Karachi, 2009) |
sewage |
5'UTR(p) |
183 |
JQ690748 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690741 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-48E3 (Quetta, 2011) |
sewage |
5'UTR(p) |
183 |
JQ690749 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690742 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-59E1 (Lahore, 2010) |
sewage |
5'UTR(p) |
183 |
JQ690750 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690743 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-67E2 (Lahore, 2010) |
sewage |
5'UTR(p) |
183 |
JQ690751 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690744 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-68E2 (Karachi, 2010) |
sewage |
5'UTR(p) |
183 |
JQ690752 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690745 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-92E1 (Karachi, 2010) |
sewage |
5'UTR(p) |
183 |
JQ690753 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690746 |
Shaukat et al., 2012 |
|
| EV-E4 |
PAK-NIH-123E1 (Karachi, 2010) |
sewage |
5'UTR(p) |
183 |
JQ690754 |
Shaukat et al., 2012 |
|
|
VP1 |
840 |
JQ690747 |
Shaukat et al., 2012 |
|
| |
|
|
|
|
|
|
|
Enterovirus E5 (EV-E5)
|
| EV-E5 |
MexKSU/5/Mexico/2015 |
Bos
taurus |
CG |
7451 |
KU172420 |
Mitra et al., 2016 |
|
| EV-E5 |
JS20-1/China/2020 |
Bos
taurus |
CG(p) |
7380 |
MW579538 |
Ji et al., unpub. |
|
| EV-E5 |
GX20-1/China/ |
Bos
taurus |
CG(p) |
7322 |
MW477470 |
Ji et al., unpub. |
|
| |
|
|
|
|
|
|
|
Enterovirus E? (EV-E?)
|
| EV-E? |
MZ468 |
Bos
taurus |
3D+3'UTR |
1454 |
D84065 |
Hamada et al., 1998 |
|
| EV-E? |
66/27 (Australia) |
Bos
taurus |
5'NCR(p)+VP4(p) |
? |
? |
McCarthy et al., 1999 |
|
| EV-E? |
BOT/209/67 (Botswana,
1967) |
Bos
taurus |
5'NCR(p) |
386 |
AJ250673 |
Lin et al.,
unpub. |
|
| |
|
|
|
|
|
|
|
CG, complete genome
(p), partial gene sequence
*, prototype strain |
References
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|
