| |
Genus: Gallivirus
Species: Gallivirus A
| Gallivirus A1 |
|
| 5' UTR |
L |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| Gallivirus A2 |
|
| 5' UTR |
L |
VP0 |
VP3 |
VP1 |
2A |
2B |
2C |
3A |
3B |
3C |
3D |
3' UTR |
|
| |
|
|
(White areas indicate genes which haven't yet been
sequenced completely;
grey areas are where only partial sequences exist)
|
Virus |
Strain |
Region |
Length |
Accession No. |
Reference |
Comments |
Gallivirus A1 (GV-A1)
|
|
GV-A1 |
chicken/USA/CHK1/2010 |
2C(p)-3'UTR |
3219 |
JF424824 |
Farkas et al., 2012 |
Gallus gallus domesticus |
|
GV-A1 |
chicken/USA/CHK165/2010 |
3D(p)+3'UTR |
1019 |
JF424825 |
Farkas et al., 2012 |
Gallus gallus domesticus |
|
GV-A1 |
chicken/USA/CHK168/2010 |
3D(p)+3'UTR |
1019 |
JF424826 |
Farkas et al., 2012 |
Gallus gallus domesticus |
|
GV-A1 |
chicken/USA/CHK175/2010 |
3D(p)+3'UTR |
1017 |
JF424827 |
Farkas et al., 2012 |
Gallus gallus domesticus |
|
GV-A1 |
turkey/USA/TRK24/2010 |
3D(p)-3'UTR |
1020 |
JF424828 |
Farkas et al., 2012 |
Meleagris gallopavo |
|
GV-A1 |
turkey/USA/TRK90/2010 |
3D(p)+3'UTR |
1020 |
JF424829 |
Farkas et al., 2012 |
Meleagris gallopavo |
|
GV-A1 |
turkey/USA/TRK91/2010 |
3D(p)+3'UTR |
1018 |
JF424830 |
Farkas et al., 2012 |
Meleagris gallopavo |
|
GV-A1 |
turkey/HUN/M176/2011 |
CG |
8496 |
JQ691613 |
Boros et al., 2012 |
Meleagris gallopavo |
|
GV-A1 |
turkey/HUN/PP3/2011 |
VP3(p)+VP1+2A(p) |
912 |
JQ691614 |
Boros et al., 2012 |
Meleagris gallopavo |
|
GV-A1 |
turkey/HUN/B177/2011 |
VP3(p)+VP1+2A(p) |
904 |
JQ691615 |
Boros et al., 2012 |
Meleagris gallopavo |
|
|
|
|
|
|
|
|
Gallivirus A2 (GV-A2) (aka chicken gallivirus 1; ChGV-1)
|
|
ChGV-1 |
ch/518C/Hong Kong/2010 |
CG |
8432 |
KF979337 |
Lau et al., 2014 |
Gallus gallus domesticus |
|
ChGV-1 |
ch/Pf-CHK1/HUN/2013 |
CG |
8506 |
KT880666 |
Boros et al., 2016 |
Gallus gallus domesticus |
|
ChGV |
ch/RS/BR/2015/2R |
3C to 3'UTR |
2226 |
MG846488 |
Lima et al., 2018 |
Gallus gallus domesticus |
|
|
|
|
|
|
|
|
Gallivirus?
|
|
? |
ch/NLD/2019/V_M_033_picorna_2 |
CG(p) |
7154 |
MW684795 |
de Rooij et al., unpub. |
Gallus gallus domesticus |
|
|
|
|
|
|
|
|
CG = complete genome
(p) = partial gene sequence |
Boros, A., Nemes, C., Pankovics, P., Kapusinszky, B., Delwart, E.
and Reuter, G. (2012). Identification and complete genome
characterization of a novel picornavirus in turkey (Meleagris
gallopavo). J Gen Virol. 93: 2171-2182. Epub 2012 Aug 8.
Boros, A., Pankovics, P., Adonyi, A., Fenyvesi, H., Day, J.M., Phan,
T.G., Delwart, E. and Reuter, G. (2016). A diarrheic chicken
simultaneously co-infected with multiple picornaviruses: Complete
genome analysis of avian picornaviruses representing up to six
genera. Virology 489: 63-74. Epub 2015 Dec 18.
Farkas, T., Fey, B., Hargitt 3rd, E., Parcells, M., Ladman, B.,
Murgia, M. and Saif, Y. (2012). Molecular detection of novel
picornaviruses in chickens and turkeys. Virus Genes 44: 262-272.
Epub 2011 Dec 13.
Lau, S.K., Woo,
P.C., Yip, C.C., Li, K.S., Fan, R.Y., Bai, R., Huang, Y., Chan, K.H. and
Yuen, K.Y. (2014). Chickens host diverse picornaviruses originated from
potential interspecies transmission with recombination. J. Gen. Virol.
95: 1929-1944.
Lima DA, Cibulski SP, Tochetto C, Varela APM, Finkler F, Teixeira
TF, Loiko MR, Cerva C, Junqueira DM, Mayer FQ, Roehe PM. The
intestinal virome of malabsorption syndrome-affected and unaffected
broilers through shotgun metagenomics. Virus Res. 2018 Dec 10. pii:
S0168-1702(18)30482-9. doi: 10.1016/j.virusres.2018.12.005. [Epub
ahead of print] PubMed PMID: 30543873.
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