|
The species
Enterovirus G (formerly named Porcine
enterovirus B) consists of a twenty-eight
(sero)types: EV-G1 to EV-G28 (Table
1).
The original porcine enterovirus
(PEV) 1 to 7 and 11 to 13 have been
reclassified and assigned to a new genus,
Teschovirus; PEV-8
has been renamed porcine sapelovirus 1 and reclassified
in the species
Sapelovirus A,
genus
Sapelovirus.
Examples of EV-G1 (KY498016, KY498017,
KY214435 plus 16 others), EV-G2 (LC316791)
and EV-G17 (KY761948) have been found which contain an inserted porcine torovirus-like papain-like cysteine
protease (PLCP) coding region inserted between 2C and 3A
(Conceição-Neto et al., 2017; Knutson et al.,
2017; Shang et al., 2017; Tsuchiaka et al.,
2018). Interestingly the PLCP regions
in the two virus types (G1 and G17) only share
87% nt and 86% aa identities.
Table 1. Enterovirus G prototype strains and their
sequences.
Current type |
Former type |
Prototype strain |
Host |
Accession no. |
EV-G1 |
PEV-9 |
pig/UKG/410/73 |
pig |
AF363453 |
EV-G2 |
PEV-10 |
pig/LP54/England/75 |
pig |
AF363455 |
EV-G3 |
PEV-14 |
pig/K23/2008/HUN |
pig |
HQ702854 |
EV-G4 |
PEV-15 |
wild boar/WBD/2011/HUN |
wild boar |
JN807387 |
EV-G5 |
OEV-1 |
sheep/TB4-OEV/2009/HUN |
sheep |
JQ277724 |
EV-G6 |
PEV-16 |
pig/2009/KOR |
pig |
JQ818253 |
EV-G7 |
- |
sheep/990/UK-NI |
sheep |
MG958646 |
EV-G8 |
- |
pig/724118/2012/Vietnam |
pig |
KJ156437 |
EV-G9 |
- |
pig/724162/2012/Vietnam |
pig |
KJ156438 |
EV-G10 |
- |
pig/734123/2012/Vietnam |
pig |
KJ156446 |
EV-G11 |
- |
pig/744257/2012/Vietnam |
pig |
KJ156451 |
EV-G12 |
- |
pig/714036/CaoLanh/VN/2012-02-13 |
pig |
KT265880 |
EV-G13 |
- |
pig/714270/CaoLanh/VN/2012-02-16 |
pig |
KT265903 |
EV-G14 |
- |
pig/714405/CaoLanh/VN/2012-02-21 |
pig |
KT265909 |
EV-G15 |
- |
pig/724307/ChauThanh/VN/2012-03-14 |
pig |
KT265941 |
EV-G16 |
- |
wild boar/BS14-173H2 |
wild boar |
KT266010 |
EV-G17 |
- |
pig/08/NC_USA/2015 |
pig |
KY761948 |
EV-G18 |
- |
pig/GER/F26-2/23-12-2013 |
pig |
MF113370 |
EV-G19 |
- |
pig/GER/F8-2/04-02-2013 |
pig |
MF113372 |
EV-G20 |
- |
goat/JL14/CHA/2014 |
goat |
KU297674 |
EV-G21 |
- |
pig/JPN/Ishi-Ka2/2016 |
pig |
LC316832 |
EV-G22 |
- |
takin/LLT03/China/2013 |
takin |
MG660831 |
EV-G23 |
- |
goat/SD-S68/China/2018 |
goat |
sequence |
EV-G24 |
- |
goat/THAI/G2055/2016 |
goat |
MH894624 |
EV-G25 |
- |
goat/THAI/G2078/2016 |
goat |
MH894625 |
EV-G26 |
- |
pig/S5391/Thailand/2016 |
pig |
MW732955 |
EV-G27 |
- |
pig/PF100/con/PicV21/China/2018 |
pig |
OP414054 |
EV-G28 |
- |
goat/CAF-6AR02-a |
goat |
OR096661 |
Table of nucleotide p-distances between
prototype VP1 sequences |
References
Conceição-Neto N, Theuns S, Cui T, Zeller M, Yinda CK, Christiaens I,
Heylen E, Van Ranst M, Carpentier S, Nauwynck HJ, Matthijnssens J.
Identification of an enterovirus recombinant with a torovirus-like gene
insertion during a diarrhea outbreak in fattening pigs. Virus Evol. 2017
Sep 8;3(2):vex024. doi: 10.1093/ve/vex024. eCollection 2017 Jul. PubMed
PMID: 28924489; PubMed Central PMCID: PMC5591953.
Knutson, T.P., Velayudhan, B.T., Marthaler, D.G.
(2017). A porcine enterovirus G associated with enteric disease contains
a novel papain-like cysteine protease. J. Gen. Virol. 98: 1305-1310. doi:
10.1099/jgv.0.000799.Shang, P., Misra, S., Hause, B., Fang, Y. (2017). A
naturally occurring recombinant enterovirus expresses a torovirus
deubiquitinase. J. Virol. 2017 May 10. pii: JVI.00450-17. doi:
10.1128/JVI.00450-17. [Epub ahead of print]
Tsuchiaka S, Naoi Y, Imai R, Masuda T, Ito M, Akagami M, Ouchi Y, Ishii
K, Sakaguchi S, Omatsu T, Katayama Y, Oba M, Shirai J, Satani Y,
Takashima Y, Taniguchi Y, Takasu M, Madarame H, Sunaga F, Aoki H, Makino
S, Mizutani T, Nagai M. Genetic diversity and recombination of
enterovirus G strains in Japanese pigs: High prevalence of strains
carrying a papain-like cysteine protease sequence in the enterovirus G
population. PLoS One. 2018 Jan 11;13(1):e0190819. doi:
10.1371/journal.pone.0190819. eCollection 2018. PubMed PMID: 29324778;
PubMed Central PMCID: PMC5764308.
Wang, M., He, J., Lu, H., Liu, Y., Deng, Y., Zhu, L., Guo, C., Tu, C.
and Wang, X. (2017). A novel enterovirus species identified from severe
diarrheal goats. PLoS One 12(4): e0174600. doi:
10.1371/journal.pone.0174600. |